# HG changeset patch
# User gga
# Date 1520850596 14400
# Node ID 99b00626720af4b737a4470dcdd3a940660edb61
# Parent  b973f3f7b50941acd402c40246b5e5bdb32c4db9
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 70fbb41d4c6b0a08a7bed4849a5ae7c865e1ab1e

diff -r b973f3f7b509 -r 99b00626720a README.rst
--- a/README.rst	Thu Feb 08 11:36:25 2018 -0500
+++ b/README.rst	Mon Mar 12 06:29:56 2018 -0400
@@ -15,7 +15,7 @@
 .. code:: bash
 
     . /path/to/galaxy/.venv/bin/activate
-    pip install future biopython bcbio-gff
+    pip install six biopython bcbio-gff
     deactivate
 
 Environment
diff -r b973f3f7b509 -r 99b00626720a create_account.py
--- a/create_account.py	Thu Feb 08 11:36:25 2018 -0500
+++ b/create_account.py	Mon Mar 12 06:29:56 2018 -0400
@@ -4,7 +4,8 @@
 import argparse
 import random
 import time
-from builtins import range, str
+
+from six.moves.builtins import str
 
 from webapollo import WAAuth, WebApolloInstance
 
diff -r b973f3f7b509 -r 99b00626720a create_features_from_gff3.py
--- a/create_features_from_gff3.py	Thu Feb 08 11:36:25 2018 -0500
+++ b/create_features_from_gff3.py	Mon Mar 12 06:29:56 2018 -0400
@@ -3,10 +3,11 @@
 import logging
 import sys
 import time
-from builtins import str
 
 from BCBio import GFF
 
+from six.moves.builtins import str
+
 from webapollo import AssertUser, GuessOrg, OrgOrGuess, WAAuth, WebApolloInstance, featuresToFeatureSchema, retry
 logging.basicConfig(level=logging.INFO)
 log = logging.getLogger(__name__)
diff -r b973f3f7b509 -r 99b00626720a export.py
--- a/export.py	Thu Feb 08 11:36:25 2018 -0500
+++ b/export.py	Mon Mar 12 06:29:56 2018 -0400
@@ -9,11 +9,8 @@
 
 from Bio import SeqIO
 
-from future import standard_library
-
 from webapollo import CnOrGuess, GuessCn, WAAuth, WebApolloInstance
 
-standard_library.install_aliases()
 try:
     import StringIO as io
 except ImportError:
diff -r b973f3f7b509 -r 99b00626720a list_organisms.xml
--- a/list_organisms.xml	Thu Feb 08 11:36:25 2018 -0500
+++ b/list_organisms.xml	Mon Mar 12 06:29:56 2018 -0400
@@ -1,5 +1,5 @@
 <?xml version="1.0"?>
-<tool id="list_organism" name="List Organisms" version="3.0">
+<tool id="list_organism" name="List Organisms" version="3.1">
   <description>in Apollo</description>
   <macros>
     <import>macros.xml</import>
diff -r b973f3f7b509 -r 99b00626720a macros.xml
--- a/macros.xml	Thu Feb 08 11:36:25 2018 -0500
+++ b/macros.xml	Mon Mar 12 06:29:56 2018 -0400
@@ -6,7 +6,7 @@
       <requirement type="package" version="1.65">biopython</requirement>
       <requirement type="package" version="0.6.2">bcbiogff</requirement>
       <requirement type="package" version="2.12.4">requests</requirement>
-      <requirement type="package" version="0.16.0">future</requirement>
+      <requirement type="package" version="1.11.0">six</requirement>
       <yield/>
     </requirements>
   </xml>
diff -r b973f3f7b509 -r 99b00626720a webapollo.py
--- a/webapollo.py	Thu Feb 08 11:36:25 2018 -0500
+++ b/webapollo.py	Mon Mar 12 06:29:56 2018 -0400
@@ -7,20 +7,18 @@
 import os
 import time
 from abc import abstractmethod
-from builtins import next
-from builtins import object
-from builtins import str
 
 from BCBio import GFF
 
 from Bio import SeqIO
 
-from future import standard_library
-
 import requests
 
+from six.moves.builtins import next
+from six.moves.builtins import object
+from six.moves.builtins import str
 
-standard_library.install_aliases()
+
 try:
     import StringIO as io
 except BaseException: