comparison json2iframe.xml @ 12:46f973ab5831 draft

planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 49fe23e3fb330234900946352fbc3a86deeeb639

11:d3f65b6ccc9e

<?xml version="1.0"?>
<tool id="iframe" name="Annotate" version="3.1">
  <description>opens an IFrame to Apollo</description>
  <macros>
    <import>macros.xml</import>
  </macros>
  <expand macro="requirements"/>
  <command detect_errors="aggressive"><![CDATA[
python $__tool_directory__/json2iframe.py
@URL@
'$json_file'
@EXT_URL@
> $output]]></command>
  <inputs>
    <param name="json_file" type="data" format="json" label="Apollo Organism Listing" />
  </inputs>
  <outputs>
    <data format="html" name="output"/>
  </outputs>
  <tests>

12:46f973ab5831

<?xml version="1.0"?>
<tool id="iframe" name="Annotate" version="@WRAPPER_VERSION@">
  <description>opens an IFrame to Apollo</description>
  <macros>
    <import>macros.xml</import>
  </macros>
  <expand macro="requirements"/>
  <command detect_errors="aggressive"><![CDATA[
python $__tool_directory__/json2iframe.py
@URL@
'$json_file'
@EXT_URL@
$tracklist
> $output]]></command>
  <inputs>
    <param name="json_file" type="data" format="json" label="Apollo Organism Listing" />
    <param name="tracklist" type="boolean" truevalue="--tracklist" falsevalue="" label="Force the tracklist on in JBrowse"/>

  </inputs>
  <outputs>
    <data format="html" name="output"/>
  </outputs>
  <tests>