Mercurial > repos > gga > apollo_export

annotate test-data/export/cds.fa @ 14:61fa763a41f7 draft

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"planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 81492a9c8b9e5649a3867bc30afe617a30fb47a1"
author gga
date Tue, 14 Apr 2020 14:34:38 +0000
parents 67109bd13a53
children f5fa6d32498c
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13
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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1 >ff2fe902-7bab-431c-be82-30ed072915d1 (mRNA) 690 residues [Merlin:2-691 + strand] [cds] name=Unknown
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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2 CGTTTAGACAAAGGTACATTATTGTATCGTGGCCAAAAATTAGACCTTCCTACATTCGAG
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
3 CATAACGCAGAGAATAAGTTGTTCTATTTCAGAAACTACGTTTCAACTTCATTAAAGCCT
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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4 CTGATCTTTGGTGAATTTGGTCGTATGTTTATGGCACTAGATGACGATACTACAATTTAT
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
5 ACTGCTGAGACGCCTGATGATTATAATCGTTTCGCAAACCCAGAAGATATAATTGATATT
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
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6 GGCGCTACTCAAAAAGACTCATTTGACGATAACAATAATGATGGAACATCTATTAATATC
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
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7 GGCAAACAAGTTAATTTAGGATTCGTTATTTCCGGTGCTGAAAATGTTCGAGTTATTGTT
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
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8 CCAGGTTCTTTAACTGAATATCCAGAAGAAGCGGAAGTTATTCTGCCTCGTGGTACTCTT
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
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9 TTGAAGATCAATAAAATCACTACTCAAGTAGATAAACGCTCGAATAAGTTCATGGTTGAA
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
10 GGTTCAATCGTTCCGCCTTCTGAGCAAATTGATGAATCTGTTGAGATTTATGACGGTGAT
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
11 CTGTTCATGGAAACAGGTGAAGTAGTAAAACTGTCCGGATTCATGCAGTTCGTCAACGAA
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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12 TCTGCATACGATGAAGAGCAAAACCAGATGGCTGCTGAGATTCTGTCTGGATTCTTGGAC
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
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13 ATTGATGACATGCCACGTAAGTTCCGCTAG
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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14 >f2e1909a-1d40-4a49-a67b-5fe2afdc4957 (mRNA) 9 residues [Merlin:752-1039 + strand] [cds] name=Unknown
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
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15 AAATTTTAG
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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16 >12fe0db6-c8e1-4bc9-b594-87c92c6c9669 (mRNA) 108 residues [Merlin:1067-2011 - strand] [cds] name=Unknown
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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17 CACCTCAATTATCACTGCCGGTACTCAACAGCTGGTAAGAAAGTCTGGTGTATCGAAATA
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
18 TCTTATTGGAGCAATGAGCAATCGTGTTGTTCAGTCTTTATTAGGTGA
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
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19 >58fc8255-95ed-4417-a373-238f826810ac (mRNA) 1056 residues [Merlin:2011-3066 - strand] [cds] name=Unknown
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
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20 ATGAGCATTAAAGTCAGAGAATTAGATGATAAGACTGATGCTTTAATTAGCGGAGTTAAA
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
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21 ACCTCCGCTGGTCAAAGTTCACAATCAGCAAAAATAAAATCCACTATAACTGCGCAATAT
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
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22 CCGTCTGAACGTTCAGCTGGTAATGACACATCTGGTTCTTTACGAGTTCATGATCTTTAT
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
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diff changeset
23 AAGAACGGGTTGTTGTTCACTGCGTATGATATGAATTCTCGTACAACCGGTGATATGCGT
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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24 AGCATGCGTTTAGGTGAAATGAAACGTACTGCAAATAGTGTAGTGAAATCAATCACTGGA
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
25 ACAAATACTAATAAAGTTGATAAAATTCCAGTAGTGAATATTTTACTTCCACGCTCGAAA
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
26 TCAGATGTTGAATCAGTTTCTCATAAATTTAATGACGTTGGAGATTCACTTATTTCTCGT
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
27 GGCGGCGGTACTGCTACAGGGGTATTAAGTAACGTTGCATCTACTGCTGTCTTTGGCGGA
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
28 TTAGAGTCATTGACTCAAGGATTAATGGCTGACCATAACGAGCAGATCTATAACACTGCT
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
29 CGATCAATGTATGGCGGCGCAGATAACCGTACGAAGGTATTCACGTGGGATTTAACTCCT
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
30 CGATCAGTACAAGATCTTATTGCTATTATCGAGATCTATGAATACTTTAACTACTATAGT
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
31 TATGGCGAAACGGGAACGTCTACTTATGCAAAAGAAGTTAAGTCTCAATTAGATGAATGG
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
32 TATAAATCAACTTTCCTTGATACATTAACTCCAGATGAAGCTAATAAAAATGACACTGTT
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
33 TTTGAGAAAATAACTTCATTCTTAAGTAATGTTATTGTTGTAAGTAACCCTACTGTGTGG
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
34 TTCGTCAGAAACTTTGGAACCACAAGTAAATTCGATGGACGTGCTGAAGTATTCGGTCCA
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
35 TGTCAAATTCAGAGTATCCGTTTTGATAAAACTCCAAATGGAAACTTTAACGGTTTAGCT
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
36 ATAGCTCCAAACCTGCCAAGTACATTCACATTAGAAATTACTATGCGTGAAATCTTGACA
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
37 TTGAACCGAGCTTCAGTATATGCGGAAGGATTCTGA
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
38 >c009dd7a-3284-4e7f-9ee1-3b56e2598e07 (mRNA) 1662 residues [Merlin:3066-4796 - strand] [cds] name=multiexongene
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
39 ATGAAAAGCGAAAACATGTCCACAATGAGACGTCGTAAAGTTATCGCTGATTCAAAGGGT
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
40 GAAAGAGATGCAGCCTCGACTGCATCTGATCAAGTAGACTCTTTAGAATTAATCGGCCTT
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
41 AAACTTGATGATGTACAAAGCGCTAATGAACTAGTTGCTGAAGTAATTGAAGAAAAGGGC
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
42 AATAACTTAATTGATTCAGTTGATAACGTCGCTGAAGGTACTGAATTAGCTGCTGAAGCA
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
43 TCTGAACGAACTACTGAGTCTATCAAGACTCTTACTGGCGTAGCGTCAACAATCAGCGAC
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
44 AAATTAAGTAAACTCGCTTCGATGCTCGAGTCGAAGGTTCAGGCTGTGGAGCAAAAAGTA
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
45 CAAGAATCTGGTGCCTCAGCTTCAACTGGGCTGTCAGTGATAGAAGATAAGCTTCCAGAT
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
46 CCTGATGAGCCTTTCTTTCCACCTGTCCCTCAGGAACCCGAGAACAACAAGAAAGATCAA
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
47 AAGAAAGATGATAAGAAACCTACCGATATGTTAGGTGACTTGCTGAAGACTACGAAGGGC
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
48 GGATTTAAAGCTACGATATCAATCACTGATAAAATATCGTCTATGCTTTTCAAATACACC
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
49 GTAACAGCATTAGCTGAAGCTGCTAAAATGGCTGCTATGCTATTTGCATTAGTATTAGGC
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
50 ATAGATTTACTTCGTATTCATTTTAAGTATTGGACTGATAAATTCATGAGTAACTTCGAT
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
51 GAATTCAGTGCTGAAGCTGGTGAATGGGGTGGACTGCTTCAATCAATTTTTGGAATGTTA
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
52 GGAGATATTAAAAAGTTCTGGGAAGCTGGAGACTGGAGTGGATTAGCAGTAGCTATTGTC
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
53 AAAGGATTAGCTGATGTGATTTACAACCTGAGCGAAATAATGTCTTTGGGAATTTCAAAG
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
54 ATATCTGCTTCTATACTCGATGCACTTGGCTTTGAAAATGCAGCAACTACTATTCGTGGT
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
55 TCAGCACTAGAAGGATTCCAGGAACGCACTGGTAATTCATTGTCTGAAGATGATCAAAAA
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
56 GCTTTGGCTAAATATCAGAGTAAGCGTATTGAAGAAGGTCCTGGAATTATTGATAAAGCT
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
57 GGCGAATTTAAAACTCGTGCATTTGATTGGGTACTAGGAAGAGAGAATAAAATCGATTCT
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
58 ACACAAGCATCTGACCGTGATCAAGAGACTCAGAATCTTAAAGCAATGGCTCCTGAAAAA
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
59 CGCGAAGAAACACTGATCAAACAAAACGAAGCTCGTGCAGCTGTTCAGCGTTTAGAAAAA
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
60 TATATTGGTGATGTTGATCCAGAGAATCCAACTAATATGCAATCTTTAGAGAAGGCATAT
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
61 AACAGTGCCAAAAAGTCTATTAGTGATTCTGCTATAAGTGATCAACCAGCTACTAAAAAG
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
62 GAACTCGATAAAAGATTCCAACGAGTAGAATCCAAGTATCAGAAGCTCAAAGAAGATAAC
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
63 ACTCCGAAGCCTGCGGCTCCAGCTACTTCGGAAGATAATCAACGAGTTCAAAATATTCAA
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
64 AAAGCTGAAAATGCTAAAGAGCAATCTAAAAAATCAACCGGTGATATGAATGTTGCTAAC
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
65 ACTCAGGTTAATAACGTAAATAATAGTAAGACTATTCACCAGGTTCAAACAGTCACGGCT
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
66 ACTCCAGCTCCTGGAGTATTCGGGGCAACAGGAGTTAATTAA
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
67 >2706ea76-172a-48c1-b940-eb603996f082 (mRNA) 6 residues [Merlin:5011-6066 - strand] [cds] name=cds-not-under-exon
67109bd13a53 "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
gga
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diff changeset
68 CTTTAA