Mercurial > repos > george-weingart > micropita

comparison micropita_prepare.py @ 4:73ab9bfbeaf1

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Updated root-dir parameter
author george-weingart
date Tue, 06 May 2014 17:15:17 -0400
parents 800220830386
children cb7b4786434d
comparison
equal deleted inserted replaced
3:800220830386 4:73ab9bfbeaf1
62 parser.add_argument('--output', action="store",dest='outputname') 62 parser.add_argument('--output', action="store",dest='outputname')
63 parser.add_argument('-m', action="store",dest='MParameter') 63 parser.add_argument('-m', action="store",dest='MParameter')
64 parser.add_argument('-n', action="store",dest='NSamples') 64 parser.add_argument('-n', action="store",dest='NSamples')
65 parser.add_argument('--lastmeta', action="store",dest='lastmeta') 65 parser.add_argument('--lastmeta', action="store",dest='lastmeta')
66 parser.add_argument('--stratify_value', action="store",dest='stratify_value') 66 parser.add_argument('--stratify_value', action="store",dest='stratify_value')
67 parser.add_argument('--root_dir', action="store", dest='root_dir',nargs='?')
68 67
69 68
70 try: 69 try:
71 parser.add_argument('--feature_method', action="store",dest='feature_method') 70 parser.add_argument('--feature_method', action="store",dest='feature_method')
72 except: 71 except:
138 if indx in TBTargets: 137 if indx in TBTargets:
139 OutputString = table_lines[indx] + "\n" 138 OutputString = table_lines[indx] + "\n"
140 OutTargetsFile.write(OutputString) 139 OutTargetsFile.write(OutputString)
141 OutTargetsFile.close() 140 OutTargetsFile.close()
142 os_command = "python " + \ 141 os_command = "python " + \
143 results.root_dir + \ 142 root_dir + \
144 "/tools/micropita/" + \ 143 "/tools/micropita/" + \
145 "MicroPITA.py "+\ 144 "MicroPITA.py "+\
146 "--lastmeta " + table_lines[LastMetaInt]+ " " +\ 145 "--lastmeta " + table_lines[LastMetaInt]+ " " +\
147 "--feature_method " + results.feature_method + " " + \ 146 "--feature_method " + results.feature_method + " " + \
148 "--target " + TempTargetsFileName + " " +\ 147 "--target " + TempTargetsFileName + " " +\
160 159
161 if results.MParameter == "representative"\ 160 if results.MParameter == "representative"\
162 or results.MParameter == "diverse"\ 161 or results.MParameter == "diverse"\
163 or results.MParameter == "extreme": 162 or results.MParameter == "extreme":
164 os_command = "python " + \ 163 os_command = "python " + \
165 results.root_dir + \ 164 root_dir + \
166 "/tools/micropita/" + \ 165 "/tools/micropita/" + \
167 "MicroPITA.py "+\ 166 "MicroPITA.py "+\
168 "--lastmeta " + table_lines[LastMetaInt]+ " " +\ 167 "--lastmeta " + table_lines[LastMetaInt]+ " " +\
169 "-m " + results.MParameter + " " + \ 168 "-m " + results.MParameter + " " + \
170 "-n " + results.NSamples + " " +\ 169 "-n " + results.NSamples + " " +\
185 184
186 185
187 if results.MParameter == "distinct"\ 186 if results.MParameter == "distinct"\
188 or results.MParameter == "discriminant": 187 or results.MParameter == "discriminant":
189 os_command = "python " + \ 188 os_command = "python " + \
190 results.root_dir + \ 189 root_dir + \
191 "/tools/micropita/" + \ 190 "/tools/micropita/" + \
192 "MicroPITA.py "+\ 191 "MicroPITA.py "+\
193 "--lastmeta " + table_lines[LastMetaInt]+ " " +\ 192 "--lastmeta " + table_lines[LastMetaInt]+ " " +\
194 "--label " + table_lines[LastMetaInt]+ " " +\ 193 "--label " + table_lines[LastMetaInt]+ " " +\
195 "-m " + results.MParameter + " " + \ 194 "-m " + results.MParameter + " " + \