# HG changeset patch # User george-weingart # Date 1409853093 14400 # Node ID ebe3cb467f8c1fee34ad9703f74f03f91cf2cce5 # Parent dba11280df2cea679a3965d4e81e0f628c68e16f Uploaded diff -r dba11280df2c -r ebe3cb467f8c export2graphlan.xml --- a/export2graphlan.xml Thu Sep 04 13:42:08 2014 -0400 +++ b/export2graphlan.xml Thu Sep 04 13:51:33 2014 -0400 @@ -42,8 +42,7 @@ Input parameters ---------------- - -# + --annotations ANNOTATIONS List which levels should be annotated in the tree. Use a comma separate values form, e.g., @@ -114,10 +113,11 @@ input parameters: You need to provide at least one of the two arguments - -i LEFSE_INPUT, --lefse_input LEFSE_INPUT - LEfSe input data + -i LEFSE_INPUT, --lefse_input LEFSE_INPUT + LEfSe input data + -o LEFSE_OUTPUT, --lefse_output LEFSE_OUTPUT - LEfSe output result data + LEfSe output result data output parameters: -t TREE, --tree TREE Output filename where save the input tree for GraPhlAn