# HG changeset patch # User george-weingart # Date 1410032100 14400 # Node ID 3712843df8d7f970ac98db4e817c99618c863f9e # Parent f9b9ad419acfe49e63483a0ae21fea7fe89a4ccd Uploaded diff -r f9b9ad419acf -r 3712843df8d7 import2graphlan.xml --- a/import2graphlan.xml Sat Sep 06 15:32:06 2014 -0400 +++ b/import2graphlan.xml Sat Sep 06 15:35:00 2014 -0400 @@ -125,25 +125,17 @@ Example: --background_clades "Bacteria.Actinobacteria,Bacteria.Bacteroidetes.Bacteroidia,Bacteria.Firmicutes.Clostridia.Clostridiales" - **--background_colors** BACKGROUND_COLORS - Set the color to use for the shaded background. Colors can be either in RGB or HSV (using a semi-colon to separate values, surrounded with ()) format. - Use a comma separate values form and surround the string with " if it contains spaces. - Example: #29cc36, (150; 100; 100), (280;80; 88) + **--background_colors** BACKGROUND_COLORS Set the color to use for the shaded background. Colors can be either in RGB or HSV (using a semi-colon to separate values, surrounded with ()) format. - - + Use a comma separate values form and surround the string with " if it contains spaces. Example: #29cc36, (150; 100; 100), (280;80; 88) - **--title TITLE** If specified set the title of the GraPhlAn plot. - Surround the string with " if it contains spaces, e.g., --title "Title example" + **--title TITLE** If specified set the title of the GraPhlAn plot. Surround the string with " if it contains spaces, e.g., --title "Title example" + + **--title_font_size** TITLE_FONT_SIZE Set the title font size. Default is 15 - **--title_font_size** TITLE_FONT_SIZE - Set the title font size. Default is 15 - - - **--def_clade_size** DEF_CLADE_SIZE - Set a default size for clades that are not found as biomarkers by LEfSe. Default is 10 + **--def_clade_size** DEF_CLADE_SIZE Set a default size for clades that are not found as biomarkers by LEfSe. Default is 10 **--min_clade_size** MIN_CLADE_SIZE