Mercurial > repos > george-weingart > graphlan_import

diff export2graphlan.xml @ 12:389074508060 draft

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Uploaded
author george-weingart
date Thu, 04 Sep 2014 14:18:23 -0400
parents 8cfabe8759ab
children 66c50eadf709
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--- a/export2graphlan.xml	Thu Sep 04 14:16:14 2014 -0400
+++ b/export2graphlan.xml	Thu Sep 04 14:18:23 2014 -0400
@@ -40,7 +40,7 @@
 
  * **Output of LEfSe**: This file is the result of LEfSe execute on the *Result of MetaPhlAn or HUMAnN analysis* file. This file allow GraPhlAn to highlight for you the found biomarkers.
 
-Input parameters6666
+Input parameters7777
 --------------------
  
     --annotations ANNOTATIONS
@@ -124,7 +124,9 @@
     Input data matrix parameters:
     --sep SEP
     --out_table OUT_TABLE   : This is where to write the  processed data matrix to file
+
     --fname_row FNAME_ROW   :  Row number containing the names of the features (default 0, specify -1 if no names are present in the matrix)
+
     --sname_row SNAME_ROW
                         column number containing the names of the samples (default 0, specify -1 if no names are present in the matrix)
     --metadata_rows METADATA_ROWS