Mercurial > repos > geert-vandeweyer > package_rseqc

changeset 1:35154a48b485 draft default tip

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Uploaded
author geert-vandeweyer
date Fri, 08 Aug 2014 03:05:18 -0400
parents 704642a18837
children
files tool_dependencies.xml
diffstat 1 files changed, 7 insertions(+), 8 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Tue Jul 29 08:30:57 2014 -0400
+++ b/tool_dependencies.xml	Fri Aug 08 03:05:18 2014 -0400
@@ -1,18 +1,17 @@
 <?xml version="1.0"?>
 <tool_dependency>
     <package name="python" version="2.7">
-	<repository changeset_revision="1e1fd239d5cf" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu"/>
+	<repository changeset_revision="74d009a2a4cb" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu"/>
     </package>
     <package name="rseqc" version="2.3.9">
         <install version = "1.0">
             <actions>
-                <!-- Not sure why these must be made apriori, but install fails otherwise -->
+                <action type="set_environment_for_install">
+          	      <repository changeset_revision="74d009a2a4cb" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+            	           <package name="python" version="2.7" />
+          	      </repository>
+	        </action>
                 <action type="download_by_url">http://sourceforge.net/projects/rseqc/files/RSeQC-2.3.9.tar.gz</action>
- 	  	<action type="set_environment_for_install">
-          		<repository changeset_revision="1e1fd239d5cf" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
-            			<package name="python" version="2.7" />
-          		</repository>
-		</action>
                 <action type="make_directory">$INSTALL_DIR/lib/python</action> 
                 <action type="make_directory">$INSTALL_DIR/lib64/python</action>
                 <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin</action>
@@ -24,7 +23,7 @@
         </install>
         <readme>
             RSeQC version 2.3.9, documentation available at http://rseqc.sourceforge.net/.
-            Requires gcc and python 2.7. This package is a test to include python 2.7 installation as a pre-installation dependency.
+            Requires gcc and python 2.7. This package is identical to the main package of nilesh, but includes python 2.7 installation as a pre-installation dependency for systems running on python 2.6 by default.
         </readme>
     </package>
 </tool_dependency>