# HG changeset patch
# User geert-vandeweyer
# Date 1406637057 14400
# Node ID 704642a18837ef5ad737286b619fc6cea16ff076

Uploaded

diff -r 000000000000 -r 704642a18837 tool_dependencies.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Tue Jul 29 08:30:57 2014 -0400
@@ -0,0 +1,30 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="python" version="2.7">
+	<repository changeset_revision="1e1fd239d5cf" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu"/>
+    </package>
+    <package name="rseqc" version="2.3.9">
+        <install version = "1.0">
+            <actions>
+                <!-- Not sure why these must be made apriori, but install fails otherwise -->
+                <action type="download_by_url">http://sourceforge.net/projects/rseqc/files/RSeQC-2.3.9.tar.gz</action>
+ 	  	<action type="set_environment_for_install">
+          		<repository changeset_revision="1e1fd239d5cf" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+            			<package name="python" version="2.7" />
+          		</repository>
+		</action>
+                <action type="make_directory">$INSTALL_DIR/lib/python</action> 
+                <action type="make_directory">$INSTALL_DIR/lib64/python</action>
+                <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin</action>
+                <action type="set_environment">
+                    <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python</environment_variable>
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>
+            RSeQC version 2.3.9, documentation available at http://rseqc.sourceforge.net/.
+            Requires gcc and python 2.7. This package is a test to include python 2.7 installation as a pre-installation dependency.
+        </readme>
+    </package>
+</tool_dependency>