# HG changeset patch
# User geert-vandeweyer
# Date 1407160239 14400
# Node ID 27ec5b7e46aaa3e61af754a23b96d1c3a0ac83a8
# Parent  6eefa441d9c71bead15844b20672731bc77b411f
Deleted selected files

diff -r 6eefa441d9c7 -r 27ec5b7e46aa cuffquant.py
--- a/cuffquant.py	Mon Aug 04 09:50:30 2014 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,41 +0,0 @@
-"""
-Cuffquant format class
-"""
-import logging
-import re
-import binascii
-
-from galaxy.datatypes.sniff import *
-from galaxy.datatypes import data
-from galaxy.datatypes.binary import Binary 
-
-log = logging.getLogger(__name__)
-
-class Cuffquant( Binary ):
-  """Class describing a CuffQuant output file"""
-  file_ext = "cxb"
-  def sniff(self,filename):
-	# cuffquant cxb file is not documented. the file seems to start with 'serialization::'
-	try:
-	  header = open(filename).read(23)
-	  if header == 'serialization::':
-		return True
-          return False
-        except:
-	  return False
-  
-  def set_peek( self, dataset, is_multi_byte=False):
-	if not dataset.dataset.purged:
-	  dataset.peek = 'Cuffquant cxb file'
-  	  dataset.blurb = data.nice_size( dataset.get_size())
-  	else:
-	  dataset.peek = 'file does not exist'
-	  dataset.blurb = 'file purged from disk'
-  def display_peek (self,dataset):
-	try:
-	  return dataset.peek
-	except:
-	  return "Cuffquant output file (%s)" % ( data.nice_size( dataset.get_size() ) )  
-
-if hasattr(Binary, 'register_sniffable_binary_format'):
-    Binary.register_sniffable_binary_format('cxb', 'cxb', Cuffquant)