Mercurial > repos > geert-vandeweyer > cufflinks

changeset 4:03fdfb596475 draft

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Uploaded
author geert-vandeweyer
date Fri, 01 Aug 2014 08:50:29 -0400
parents 1312bf8f5e17
children 261425bba55d
files cufflinks_wrapper.xml
diffstat 1 files changed, 1 insertions(+), 6 deletions(-) [+]
line wrap: on
line diff
--- a/cufflinks_wrapper.xml	Fri Aug 01 08:48:32 2014 -0400
+++ b/cufflinks_wrapper.xml	Fri Aug 01 08:50:29 2014 -0400
@@ -42,11 +42,6 @@
             -u
             #end if
 	    
-	    ## use mask file?
-	    #if $mask_file:
-		--mask-file=$mask_file
-	    #end if
-
             ## Include global model if available.
             #if $global_model:
                 --global_model=$global_model
@@ -55,7 +50,7 @@
 	    ## advanced settings
 	    #if $advanced_settings.use_advanced_settings == "Yes":
 		--library-type=$advanced_settings.library_type
-		#if $mask_file:
+		#if $advanced_settings.mask_file:
 			--mask-file=$advanced_settings.mask_file
 	    	#end if
 		--inner-mean-dist=$advanced_settings.inner_mean_dist