comparison cufflinks_wrapper.py @ 6:82f0d5660884 draft

Uploaded

5:261425bba55d

    if options.no_faux_reads:
	cmd += ( " --no-faux-reads" )
    if options.multi_read_correct:
        cmd += ( " -u" )

    if options.library_type && options.library_type != 'auto':
	cmd += ( " --library-type %s" % options.library_type)
    if options.mask_file:
	cmd += ( " --mask-file %s" % options.mask_file )
    if options.inner_mean_dist:
        cmd += ( " -m %i" % int ( options.inner_mean_dist ) )

6:82f0d5660884

    if options.no_faux_reads:
	cmd += ( " --no-faux-reads" )
    if options.multi_read_correct:
        cmd += ( " -u" )

    if options.library_type and options.library_type != 'auto':
	cmd += ( " --library-type %s" % options.library_type)
    if options.mask_file:
	cmd += ( " --mask-file %s" % options.mask_file )
    if options.inner_mean_dist:
        cmd += ( " -m %i" % int ( options.inner_mean_dist ) )