# HG changeset patch # User geert-vandeweyer # Date 1406556377 14400 # Node ID aaf5c557af13c7793655a7f7285af3e832464706 # Parent 4a74b359e94134272974bb292cc7fc2465c9294a Uploaded diff -r 4a74b359e941 -r aaf5c557af13 run_cf0611.pl --- a/run_cf0611.pl Mon Jul 28 09:59:07 2014 -0400 +++ b/run_cf0611.pl Mon Jul 28 10:06:17 2014 -0400 @@ -30,7 +30,8 @@ my $partnerfile=''; my $cwd = getcwd(); -my $scriptspath = $cffile = ''; +my $scriptspath = ''; +my $cffile = ''; # Galaxy installer puts scripts and jar into a folder, which is available under the environment variable CF_PATH if (defined($ENV{'CF_PATH'}) && -d $ENV{'CF_PATH'}) { $scriptspath = $ENV{'CF_PATH'}."/cf_scripts";