# HG changeset patch
# User geert-vandeweyer
# Date 1407748855 14400
# Node ID 33a456e6dadc58d6771a65c16b3a741046edcd94
# Parent  42439d29305d34f717d997a6e00ab31bca462d0b
remove output dir tag, set remove temp to true

diff -r 42439d29305d -r 33a456e6dadc ClusterFast.xml
--- a/ClusterFast.xml	Fri Aug 08 05:30:54 2014 -0400
+++ b/ClusterFast.xml	Mon Aug 11 05:20:55 2014 -0400
@@ -11,14 +11,13 @@
 	-p "${indexes.fields.path}" 
 		
       ## output files
-      	-o $__new_file_path__  ## use galaxy temp dir for automatic cleanup.
 	-c $contigs
 	-y $bp1
 	-z $bp2
 	 
 
       ## run parameters
-      	-r 0 ## clean up not needed, as this is in galaxy tmp.
+      	-r 1
       	-m1 $m1
 	-m2 $m2
 	-d $distance