# HG changeset patch # User galaxyp # Date 1627126771 0 # Node ID f578aa80492bb1fd6b467fd3c4f13c979b801ea5 # Parent b4daae2c7459db70f3fae1d33f7e00eaa9a794de "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidespectrummatching commit c36184e88da16842e748a19c2dfabaa30a1f6a15" diff -r b4daae2c7459 -r f578aa80492b proteomiqon_peptidespectrummatching.xml --- a/proteomiqon_peptidespectrummatching.xml Thu Jul 15 07:10:28 2021 +0000 +++ b/proteomiqon_peptidespectrummatching.xml Sat Jul 24 11:39:31 2021 +0000 @@ -179,7 +179,7 @@ With this it is possible to query the peptide data base for every precursor ion mass +/- a tolerance (which defines the so called 'search space') and retrieve peptides that are theoretical candidates for a match. For each of the peptide candidates we create an theoretical spectrum in silico and compare it to the measured MS/MS scan. -.. image:: PSM.png +.. image:: $PATH_TO_IMAGES/PSM.png :width: 768pt :height: 563pt