diff test-data/result_3.json @ 0:fd5af6775e87 draft default tip

"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_labelfreeproteinquantification commit 3d3272b1ebe527f4b1e80c08f915c6235625621c"
author galaxyp
date Wed, 13 Oct 2021 18:44:47 +0000
parents
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/result_3.json	Wed Oct 13 18:44:47 2021 +0000
@@ -0,0 +1,198 @@
+
+            
+            {
+                "ModificationFilter": {
+                    "Case": "UseOnly",
+                    "Fields": [
+                        [
+                            {
+                                "Case": "Acetylation'ProtNTerm'"
+                            },
+                            {
+                                "Case": "Carbamidomethyl'Cys'"
+                            },
+                            {
+                                "Case": "Oxidation'Met'"
+                            },
+                            {
+                                "Case": "Phosphorylation'Ser'Thr'Tyr'"
+                            },
+                            {
+                                "Case": "Pyro_Glu'GluNterm'"
+                            },
+                            {
+                                "Case": "Pyro_Glu'GlnNterm'"
+                            },
+                        ]
+                    ]
+                },
+                "AggregatePeptideChargeStatesParams": {
+                    "Case": "Some",
+                    "Fields": [
+                        {
+                            "Transform": {
+                                "Case": "Some",
+                                "Fields": [
+                                    {
+                                        "Light": {
+                                            "Case": "Some",
+                                            "Fields": [
+                                                {
+                                                    "Case": "Substract",
+                                                    "Fields": [
+                                                        2.0
+                                                    ]
+                                                }
+                                            ]
+                                        },
+                                    }
+                                ]
+                            },
+                            "SingleFilters": {
+                                "Case": "Some",
+                                "Fields": [
+                                    {
+                                        "Light": {
+                                            "Case": "Some",
+                                            "Fields": [
+                                                [
+                                                    {
+                                                        "Case": "IsBiggerThan",
+                                                        "Fields": [
+                                                            1.0 
+                                                        ]
+                                                    },
+                                                ]
+                                            ]
+                                        },
+                                    }
+                                ]
+                            },
+                            "GroupFilters": {
+                                "Case": "Some",
+                                "Fields": [
+                                    {
+                                        "Light": {
+                                            "Case": "Some",
+                                            "Fields": [
+                                                [
+                                                    {
+                                                        "Case": "Stdev",
+                                                        "Fields": [
+                                                        2.0
+                                                        ]
+                                                    }
+                                                ]
+                                            ]
+                                        },
+                                    }
+                                ]
+                            },
+                            "Aggregation": {
+                                "Light": {
+                                    "Case": "Median"
+                                }
+                            }
+                        }
+                    ]                    
+                },
+                "AggregateModifiedPeptidesParams": {
+                    "Case": "Some",
+                    "Fields": [
+                        {
+                            "Transform": {
+                                "Case": "Some",
+                                "Fields": [
+                                    {
+                                        "Light": {
+                                            "Case": "Some",
+                                            "Fields": [
+                                                {
+                                                    "Case": "Add",
+                                                    "Fields": [
+                                                        2.0
+                                                    ]
+                                                }
+                                            ]
+                                        },
+                                    }
+                                ]
+                            },
+                            "SingleFilters": {
+                                "Case": "Some",
+                                "Fields": [
+                                    {
+                                        "Light": {
+                                            "Case": "Some",
+                                            "Fields": [
+                                                [
+                                                    {
+                                                        "Case": "IsSmallerThan",
+                                                        "Fields": [
+                                                            2.0 
+                                                        ]
+                                                    }
+                                                ]
+                                            ]
+                                        },
+                                    }
+                                ]
+                            },
+                            "GroupFilters": {
+                                "Case": "Some",
+                                "Fields": [
+                                    {
+                                        "Light": {
+                                            "Case": "Some",
+                                            "Fields": [
+                                                [
+                                                    {
+                                                        "Case": "Tukey",
+                                                        "Fields": [
+                                                        1.0
+                                                        ]
+                                                    },
+                                                ]
+                                            ]
+                                        },
+                                    }
+                                ]
+                            },
+                            "Aggregation": {
+                                "Light": {
+                                    "Case": "Sum"
+                                }
+                            }
+                        }
+                    ]                    
+                },
+                "AggregateToProteinGroupsParams": {
+                    "Transform": {
+                        "Case": "Some",
+                        "Fields": [
+                            {
+                                "Light": {
+                                    "Case": "Some",
+                                    "Fields": [
+                                        {
+                                            "Case": "DivideBy",
+                                            "Fields": [
+                                                2.0
+                                            ]
+                                        }
+                                    ]
+                                },
+                            }
+                        ]
+                    },
+                    "SingleFilters": null,
+                    "GroupFilters": null,
+                    "Aggregation": {
+                        "Light": {
+                            "Case": "Mean"
+                        }
+                    }                   
+                },
+            }                
+            
+        
\ No newline at end of file