# HG changeset patch
# User galaxyp
# Date 1484775810 18000
# Node ID 515c835c2f077a8ec357043b44fdf5c0c64f78b7
# Parent  2375ad43661f9f7f04cfecb2db233076f4eebf8a
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit 9434ce2f6323d91e6b10eeabab531d5e13ef4a6f

diff -r 2375ad43661f -r 515c835c2f07 searchgui.xml
--- a/searchgui.xml	Fri Jan 13 14:15:29 2017 -0500
+++ b/searchgui.xml	Wed Jan 18 16:43:30 2017 -0500
@@ -30,7 +30,7 @@
         echo "searchgui.version=@SEARCHGUI_VERSION@" >> searchgui.properties;
 
         #for $mgf in $peak_lists:
-            #set $input_name = $mgf.display_name.replace(".mgf", "") + ".mgf"
+            #set $input_name = $mgf.display_name.split('/')[-1].replace(".mgf", "") + ".mgf"
             ln -s -f '${mgf}' '${input_name}';
             #set $encoded_id = $__app__.security.encode_id($mgf.id)
             echo "Spectrums:${mgf.display_name}(API:${encoded_id}) ";