# HG changeset patch
# User galaxyp
# Date 1525077670 14400
# Node ID 263440bb190043b42dd2b8c2fa407a172ecde1e7
# Parent 7b72e889dafdfa48be243c09826008888160f158
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit 62699d7e79ddbe3374ed28dfeb9002e8efa4c544
diff -r 7b72e889dafd -r 263440bb1900 macros.xml
--- a/macros.xml Tue Mar 20 05:09:12 2018 -0400
+++ b/macros.xml Mon Apr 30 04:41:10 2018 -0400
@@ -49,7 +49,7 @@
3
- 3.2.13
+ 3.2.24
diff -r 7b72e889dafd -r 263440bb1900 peptide_shaker.xml
--- a/peptide_shaker.xml Tue Mar 20 05:09:12 2018 -0400
+++ b/peptide_shaker.xml Mon Apr 30 04:41:10 2018 -0400
@@ -1,4 +1,4 @@
-
+
Perform protein identification using various search engines based on results from SearchGUI
@@ -6,7 +6,7 @@
macros.xml
- peptide-shaker
+ peptide-shaker
diff -r 7b72e889dafd -r 263440bb1900 searchgui.xml
--- a/searchgui.xml Tue Mar 20 05:09:12 2018 -0400
+++ b/searchgui.xml Mon Apr 30 04:41:10 2018 -0400
@@ -1,4 +1,4 @@
-
+
Perform protein identification using various search engines and prepare results for input to Peptide Shaker
@@ -158,7 +158,6 @@
-ms_amanda_mono ${advanced_options.ms_amanda.ms_amanda_mono}
#end if
- #* Not working in tests
#if $advanced_options.myrimatch.myrimatch_advanced == "yes"
-myrimatch_min_pep_length ${advanced_options.myrimatch.myrimatch_min_pep_length}
-myrimatch_max_pep_length ${advanced_options.myrimatch.myrimatch_max_pep_length}
@@ -176,7 +175,7 @@
-myrimatch_num_batches ${advanced_options.myrimatch.myrimatch_num_batches}
-myrimatch_max_peak ${advanced_options.myrimatch.myrimatch_max_peak}
#end if
- *#
+
#* Not working in tests
#if $advanced_options.andromeda.andromeda_advanced == "yes"
@@ -456,8 +455,6 @@
-
-
-
+