diff macros.xml @ 18:ffed32e397cb draft

Uploaded

--- a/macros.xml	Fri Jun 10 09:57:31 2016 -0400
+++ b/macros.xml	Wed Jan 11 13:06:06 2017 -0500
@@ -4,6 +4,7 @@
             <exit_code range="1:" level="fatal" description="Job Failed" />
             <regex match="java.*Exception" level="fatal" description="Java Exception"/> 
             <regex match="Could not create the Java virtual machine" level="fatal" description="JVM Error"/>
+            <regex match="CompomicsError" level="fatal" description="Compomics Error"/>
         </stdio>
     </xml>
     <token name="@GENERAL_PARAMETERS@">
@@ -25,8 +26,8 @@
             -fi $forward_ion
             -ri $reverse_ion
     </token>
-    <token name="@SEARCHGUI_MAJOR_VERSION@">2</token>
-    <token name="@SEARCHGUI_VERSION@">2.9</token>
+    <token name="@SEARCHGUI_MAJOR_VERSION@">3</token>
+    <token name="@SEARCHGUI_VERSION@">3.1.4</token>
     <xml name="general_options">
         <param name="precursor_ion_tol_units" type="select" label="Precursor Ion Tolerance Units"
             help="Select based on instrument used, as different machines provide different quality of spectra. ppm is a standard for most precursor ions">