# HG changeset patch
# User galaxyp
# Date 1667227310 0
# Node ID 2045f3b6877356a554f982a3903b3181d68fbac8
# Parent  29e6417b913c0097648a79fc7f7ec7924a33be69
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/pepquery2 commit 4b3991069094a9703904b2041d983315bf539aee

diff -r 29e6417b913c -r 2045f3b68773 pepquery2.xml
--- a/pepquery2.xml	Mon Oct 31 13:36:14 2022 +0000
+++ b/pepquery2.xml	Mon Oct 31 14:41:50 2022 +0000
@@ -508,7 +508,7 @@
                     <param name="num_random_peptides" value="1000"/>
                 </section>
             </section>
-            <output name="psm_txt">
+            <output name="psm_rank_txt">
                 <assert_contents>
                     <has_text text="LVVVGADGVGK" />
                     <not_has_text text="AHSSMVGVNLPQK" />
@@ -577,7 +577,7 @@
                     <param name="num_random_peptides" value="1000"/>
                 </section>
             </section>
-            <output name="psm_txt">
+            <output name="psm_rank_txt">
                 <assert_contents>
                     <has_text text="LVVVGADGVGK" />
                     <not_has_text text="AHSSMVGVNLPQK" />
@@ -649,7 +649,7 @@
                     <param name="num_random_peptides" value="1000"/>
                 </section>
             </section>
-            <output name="psm_txt">
+            <output name="psm_rank_txt">
                 <assert_contents>
                     <has_text text="ELGSSDLTAR" />
                 </assert_contents>
@@ -688,7 +688,7 @@
             <section name="modifications">
                  <param name="unmodified" value="True"/>
             </section>
-            <output name="psm_txt">
+            <output name="psm_rank_txt">
                 <assert_contents>
                     <has_text text="AHSSMVGVNLPQK" />
                     <has_text text="6CPTAC_LUAD_W_BI_20180718_KL_f12:20286:3" />