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comparison pdm_fdr.xml @ 1:5446df09e4ab draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/pdm_fdr commit e5fc2c55b297c797ae744f04b42dded24d8523e6
author galaxyp
date Fri, 27 Sep 2019 15:14:16 -0400
parents 6dfa920caa52
children 2e5889f6ca44
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0:6dfa920caa52 1:5446df09e4ab
11 <exit_code range="1:" /> 11 <exit_code range="1:" />
12 </stdio> 12 </stdio>
13 <command><![CDATA[ 13 <command><![CDATA[
14 Rscript '${__tool_directory__}/PMD_FDR_package_for_Galaxy.R' 14 Rscript '${__tool_directory__}/PMD_FDR_package_for_Galaxy.R'
15 --psm_report '$psm_report' 15 --psm_report '$psm_report'
16 #if psm_report_1_percent: 16 #if $psm_report_1_percent:
17 --psm_report_1_percent '$psm_report_1_percent' 17 --psm_report_1_percent '$psm_report_1_percent'
18 #end if 18 #end if
19 --input_file_type $input_file_type 19 --input_file_type $input_file_type
20 --score_field_name "$score_field_name" 20 --score_field_name "$score_field_name"
21 --output_g_fdr '$output_g_fdr' 21 --output_g_fdr '$output_g_fdr'