Mercurial > repos > galaxyp > openms_xtandemadapter

comparison XTandemAdapter.xml @ 3:c1f0d8bf2347 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 43193e51cde5940f6fb6c9e64f8734a7a7e77315
author galaxyp
date Thu, 27 Apr 2017 16:16:12 -0400
parents 091c5c67ae88
children bd3bc2d8aaa0
comparison
equal deleted inserted replaced
2:342f5af0d62f 3:c1f0d8bf2347
145 <param name="param_max_precursor_charge" type="integer" value="4" label="Maximum precursor charge" help="(-max_precursor_charge) "/> 145 <param name="param_max_precursor_charge" type="integer" value="4" label="Maximum precursor charge" help="(-max_precursor_charge) "/>
146 <param name="param_allow_isotope_error" display="radio" type="select" optional="False" value="yes" label="If set, misassignment to the first and second isotopic 13C peak are also considered" help="(-allow_isotope_error) "> 146 <param name="param_allow_isotope_error" display="radio" type="select" optional="False" value="yes" label="If set, misassignment to the first and second isotopic 13C peak are also considered" help="(-allow_isotope_error) ">
147 <option value="yes" selected="true">yes</option> 147 <option value="yes" selected="true">yes</option>
148 <option value="no">no</option> 148 <option value="no">no</option>
149 </param> 149 </param>
150 <repeat name="rep_param_fixed_modifications" min="0" max="1" title="param_fixed_modifications"> 150 <repeat name="rep_param_fixed_modifications" min="0" title="param_fixed_modifications">
151 <param name="param_fixed_modifications" type="select" optional="True" label="Fixed modifications, specified using UniMod (www.unimod.org) terms," help="(-fixed_modifications) e.g. 'Carbamidomethyl (C)' or 'Oxidation (M)'"> 151 <param name="param_fixed_modifications" type="select" optional="True" label="Fixed modifications, specified using UniMod (www.unimod.org) terms," help="(-fixed_modifications) e.g. 'Carbamidomethyl (C)' or 'Oxidation (M)'">
152 <option value="2-dimethylsuccinyl (C)">2-dimethylsuccinyl (C)</option> 152 <option value="2-dimethylsuccinyl (C)">2-dimethylsuccinyl (C)</option>
153 <option value="2-monomethylsuccinyl (C)">2-monomethylsuccinyl (C)</option> 153 <option value="2-monomethylsuccinyl (C)">2-monomethylsuccinyl (C)</option>
154 <option value="2-nitrobenzyl (Y)">2-nitrobenzyl (Y)</option> 154 <option value="2-nitrobenzyl (Y)">2-nitrobenzyl (Y)</option>
155 <option value="2-succinyl (C)">2-succinyl (C)</option> 155 <option value="2-succinyl (C)">2-succinyl (C)</option>