diff MapRTTransformer.xml @ 1:bcb3f7dc36e1 draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 820d990f9217706e693b8a2f1da91e13c09cb0fb
author galaxyp
date Tue, 18 Apr 2017 15:41:44 -0400
parents 34e4f136ff49
children 1b460a43ae29
line wrap: on
line diff
--- a/MapRTTransformer.xml	Wed Mar 01 10:00:22 2017 -0500
+++ b/MapRTTransformer.xml	Tue Apr 18 15:41:44 2017 -0400
@@ -31,7 +31,12 @@
   -store_original_rt
 #end if
 #if $param_model_type:
-  -model:type $param_model_type
+  -model:type
+  #if " " in str($param_model_type):
+    "$param_model_type"
+  #else
+    $param_model_type
+  #end if
 #end if
 #if $param_model_linear_symmetric_regression:
   -model:linear:symmetric_regression
@@ -43,7 +48,12 @@
   -model:b_spline:num_nodes $param_model_b_spline_num_nodes
 #end if
 #if $param_model_b_spline_extrapolate:
-  -model:b_spline:extrapolate $param_model_b_spline_extrapolate
+  -model:b_spline:extrapolate
+  #if " " in str($param_model_b_spline_extrapolate):
+    "$param_model_b_spline_extrapolate"
+  #else
+    $param_model_b_spline_extrapolate
+  #end if
 #end if
 #if $param_model_b_spline_boundary_condition:
   -model:b_spline:boundary_condition $param_model_b_spline_boundary_condition
@@ -58,16 +68,36 @@
   -model:lowess:delta $param_model_lowess_delta
 #end if
 #if $param_model_lowess_interpolation_type:
-  -model:lowess:interpolation_type $param_model_lowess_interpolation_type
+  -model:lowess:interpolation_type
+  #if " " in str($param_model_lowess_interpolation_type):
+    "$param_model_lowess_interpolation_type"
+  #else
+    $param_model_lowess_interpolation_type
+  #end if
 #end if
 #if $param_model_lowess_extrapolation_type:
-  -model:lowess:extrapolation_type $param_model_lowess_extrapolation_type
+  -model:lowess:extrapolation_type
+  #if " " in str($param_model_lowess_extrapolation_type):
+    "$param_model_lowess_extrapolation_type"
+  #else
+    $param_model_lowess_extrapolation_type
+  #end if
 #end if
 #if $param_model_interpolated_interpolation_type:
-  -model:interpolated:interpolation_type $param_model_interpolated_interpolation_type
+  -model:interpolated:interpolation_type
+  #if " " in str($param_model_interpolated_interpolation_type):
+    "$param_model_interpolated_interpolation_type"
+  #else
+    $param_model_interpolated_interpolation_type
+  #end if
 #end if
 #if $param_model_interpolated_extrapolation_type:
-  -model:interpolated:extrapolation_type $param_model_interpolated_extrapolation_type
+  -model:interpolated:extrapolation_type
+  #if " " in str($param_model_interpolated_extrapolation_type):
+    "$param_model_interpolated_extrapolation_type"
+  #else
+    $param_model_interpolated_extrapolation_type
+  #end if
 #end if
 #if $adv_opts.adv_opts_selector=='advanced':
     #if $adv_opts.param_force: