# HG changeset patch # User galaxyp # Date 1518443792 18000 # Node ID e6bd0d1dbca6ed644df25d7f902f2e53a2449b0c # Parent 39591c2f77ea4bf2324d5e0f5ee82c42350eee2e planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 42171f39c42277bcfb50271180dcc9c82d3e8e74 diff -r 39591c2f77ea -r e6bd0d1dbca6 readme.md --- a/readme.md Sat Oct 28 04:32:10 2017 -0400 +++ b/readme.md Mon Feb 12 08:56:32 2018 -0500 @@ -117,7 +117,14 @@ [...] ]]> ``` - + + * In Xtandem Converter and probably in others: + + ``` + #if str($param_missed_cleavages) != '': + ``` + This is because integers needs to be compared as string otherwise `0` becomes `false`. + * In `MetaProSIP.xml` add `R` as a requirement: ``` @@ -164,7 +171,8 @@ ``` - * These tools have multiple outputs (number of inputs = number of outputs) which is not yet supported in Galaxy-stable and are therefore in `SKIP_TOOLS_FILES.txt`: + * These tools have multiple outputs (number of inputs = number of outputs) which is not yet supported in + by the automatic conversion step and are therefore in `SKIP_TOOLS_FILES.txt`: * SeedListGenerator * SpecLibSearcher * MapAlignerIdentification