# HG changeset patch # User galaxyp # Date 1518443630 18000 # Node ID 2a5738ecd2fc5042212de67d17d9f6857f9a5730 # Parent b422a2d6d05c60312491a9a2853b2a670a4c7b60 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 42171f39c42277bcfb50271180dcc9c82d3e8e74 diff -r b422a2d6d05c -r 2a5738ecd2fc readme.md --- a/readme.md Sat Oct 28 04:29:31 2017 -0400 +++ b/readme.md Mon Feb 12 08:53:50 2018 -0500 @@ -117,7 +117,14 @@ [...] ]]> ``` - + + * In Xtandem Converter and probably in others: + + ``` + #if str($param_missed_cleavages) != '': + ``` + This is because integers needs to be compared as string otherwise `0` becomes `false`. + * In `MetaProSIP.xml` add `R` as a requirement: ``` @@ -164,7 +171,8 @@ ``` - * These tools have multiple outputs (number of inputs = number of outputs) which is not yet supported in Galaxy-stable and are therefore in `SKIP_TOOLS_FILES.txt`: + * These tools have multiple outputs (number of inputs = number of outputs) which is not yet supported in + by the automatic conversion step and are therefore in `SKIP_TOOLS_FILES.txt`: * SeedListGenerator * SpecLibSearcher * MapAlignerIdentification