# HG changeset patch # User galaxyp # Date 1518444156 18000 # Node ID aa76d3d3e7518e87834b4b37cc165811644bec81 # Parent e60d63bb40a21b24ae01a4398d77bc84bffa3f36 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 42171f39c42277bcfb50271180dcc9c82d3e8e74 diff -r e60d63bb40a2 -r aa76d3d3e751 readme.md --- a/readme.md Sat Oct 28 04:24:51 2017 -0400 +++ b/readme.md Mon Feb 12 09:02:36 2018 -0500 @@ -117,7 +117,14 @@ [...] ]]> ``` - + + * In Xtandem Converter and probably in others: + + ``` + #if str($param_missed_cleavages) != '': + ``` + This is because integers needs to be compared as string otherwise `0` becomes `false`. + * In `MetaProSIP.xml` add `R` as a requirement: ``` @@ -164,7 +171,8 @@ ``` - * These tools have multiple outputs (number of inputs = number of outputs) which is not yet supported in Galaxy-stable and are therefore in `SKIP_TOOLS_FILES.txt`: + * These tools have multiple outputs (number of inputs = number of outputs) which is not yet supported in + by the automatic conversion step and are therefore in `SKIP_TOOLS_FILES.txt`: * SeedListGenerator * SpecLibSearcher * MapAlignerIdentification