comparison macros.xml @ 18:6daaa75ccb99 draft

"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 6e7368b7f178fbd1f08c28eea1b538add6943a65-dirty"

17:6f6c1cb968a0

<!-- CTD2Galaxy depends on this file and on the stdio, advanced_options macros!
     You can edit this file to add your own macros, if you so desire, or you can
     add additional macro files using the m/macros parameter -->
<macros>
  <token name="@TOOL_VERSION@">2.6</token>
  <xml name="requirements">
    <requirements>
      <requirement type="package" version="@TOOL_VERSION@">openms</requirement>
      <requirement type="package" version="@TOOL_VERSION@">openms-thirdparty</requirement>
      <!-- makeblastdb for OMSSAAdapter -->

#end def
#def gxy2omsext(g)
    #set m={'txt': 'txt', 'tabular': 'tsv', 'xml': 'bioml', 'consensusxml': 'consensusXML', 'csv': 'csv', 'dta': 'dta', 'dta2d': 'dta2d', 'edta': 'edta', 'fasta': 'fa', 'featurexml': 'featureXML', 'html': 'html', 'idxml': 'idXML', 'json': 'json', 'kroenik': 'kroenik', 'mascotxml': 'mascotXML', 'mgf': 'mgf', 'mrm': 'mrm', 'sirius.ms': 'ms', 'ms2': 'ms2', 'msp': 'msp', 'mzdata': 'mzData', 'mzid': 'mzid', 'mzml': 'mzML', 'mzq': 'mzq', 'mztab': 'mzTab', 'mzxml': 'mzXML', 'obo': 'obo', 'osw': 'osw', 'paramxml': 'paramXML', 'peff': 'fasta', 'peplist': 'peplist', 'pepxml': 'pep.xml', 'png': 'png', 'protxml': 'protXML', 'psms': 'psms', 'pqp': 'pqp', 'qcml': 'qcML', 'spec.xml': 'spec.xml', 'splib': 'splib', 'sqmass': 'sqMass', 'tandem': 'tandem.xml', 'trafoxml': 'trafoXML', 'traml': 'traML', 'thermo.raw': 'raw', 'tsv': 'xls', 'xquest.xml': 'xquest.xml'}
    #return m[g]
#end def
]]></token></macros>

18:6daaa75ccb99

<!-- CTD2Galaxy depends on this file and on the stdio, advanced_options macros!
     You can edit this file to add your own macros, if you so desire, or you can
     add additional macro files using the m/macros parameter -->
<macros>
  <token name="@TOOL_VERSION@">2.6</token>
  <token name="@GALAXY_VERSION@">0</token>
  <xml name="requirements">
    <requirements>
      <requirement type="package" version="@TOOL_VERSION@">openms</requirement>
      <requirement type="package" version="@TOOL_VERSION@">openms-thirdparty</requirement>
      <!-- makeblastdb for OMSSAAdapter -->

#end def
#def gxy2omsext(g)
    #set m={'txt': 'txt', 'tabular': 'tsv', 'xml': 'bioml', 'consensusxml': 'consensusXML', 'csv': 'csv', 'dta': 'dta', 'dta2d': 'dta2d', 'edta': 'edta', 'fasta': 'fa', 'featurexml': 'featureXML', 'html': 'html', 'idxml': 'idXML', 'json': 'json', 'kroenik': 'kroenik', 'mascotxml': 'mascotXML', 'mgf': 'mgf', 'mrm': 'mrm', 'sirius.ms': 'ms', 'ms2': 'ms2', 'msp': 'msp', 'mzdata': 'mzData', 'mzid': 'mzid', 'mzml': 'mzML', 'mzq': 'mzq', 'mztab': 'mzTab', 'mzxml': 'mzXML', 'obo': 'obo', 'osw': 'osw', 'paramxml': 'paramXML', 'peff': 'fasta', 'peplist': 'peplist', 'pepxml': 'pep.xml', 'png': 'png', 'protxml': 'protXML', 'psms': 'psms', 'pqp': 'pqp', 'qcml': 'qcML', 'spec.xml': 'spec.xml', 'splib': 'splib', 'sqmass': 'sqMass', 'tandem': 'tandem.xml', 'trafoxml': 'trafoXML', 'traml': 'traML', 'thermo.raw': 'raw', 'tsv': 'xls', 'xquest.xml': 'xquest.xml'}
    #return m[g]
#end def
]]></token><token name="@GALAXY_VERSION@">0</token><token name="@GALAXY_VERSION@">0</token></macros>