# HG changeset patch
# User galaxyp
# Date 1493311975 14400
# Node ID 77528cc89102b47ecd3fb6e476ab8cde387e56a2
# Parent a5bd48b066e87725501e771186901ef0bb1325b0
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 50c26f7fbe8a2bd1347c860d7a62480865efc254
diff -r a5bd48b066e8 -r 77528cc89102 IDFileConverter.xml
--- a/IDFileConverter.xml Tue Apr 18 15:35:57 2017 -0400
+++ b/IDFileConverter.xml Thu Apr 27 12:52:55 2017 -0400
@@ -10,50 +10,59 @@
- IDFileConverter
+
@@ -92,7 +101,7 @@
-
+
Converts identification engine file formats.
diff -r a5bd48b066e8 -r 77528cc89102 readme.md
--- a/readme.md Tue Apr 18 15:35:57 2017 -0400
+++ b/readme.md Thu Apr 27 12:52:55 2017 -0400
@@ -102,10 +102,32 @@
[...]
]]>
```
+
+ * In `IDFileConverter.xml` the following is needed in the command section at the beginning (check your file to know what to copy where):
+
+ ```
+
+ ```
+
+ * In `IDFileConverter.xml` and `FileConverter.xml` add `auto_format="true"` to the output, e.g.:
-
+ - ``
+ - ``
* To add an example test case to `DecoyDatabase.xml` add the following after the output section. If standard settings change you might have to adjust the options and/or the test files.