Mercurial > repos > galaxyp > openms_databasefilter
diff DatabaseFilter.xml @ 9:3fb6d46da3db draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author | galaxyp |
---|---|
date | Wed, 15 May 2019 06:51:10 -0400 |
parents | 0617defc2f4d |
children | 21c4273d1890 |
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--- a/DatabaseFilter.xml Mon Feb 12 08:58:19 2018 -0500 +++ b/DatabaseFilter.xml Wed May 15 06:51:10 2019 -0400 @@ -1,7 +1,7 @@ <?xml version='1.0' encoding='UTF-8'?> -<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.--> +<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTDConverter.--> <!--Proposed Tool Section: [Utilities]--> -<tool id="DatabaseFilter" name="DatabaseFilter" version="2.2.0"> +<tool id="DatabaseFilter" name="DatabaseFilter" version="2.3.0"> <description>Filters a protein database (FASTA format) based on identified proteins</description> <macros> <token name="@EXECUTABLE@">DatabaseFilter</token> @@ -10,7 +10,7 @@ <expand macro="references"/> <expand macro="stdio"/> <expand macro="requirements"/> - <command>DatabaseFilter + <command detect_errors="aggressive"><![CDATA[DatabaseFilter #if $param_in: -in $param_in @@ -34,7 +34,7 @@ -force #end if #end if -</command> +]]></command> <inputs> <param name="param_in" type="data" format="fasta" optional="False" label="Input FASTA file, containing a database" help="(-in) "/> <param name="param_id" type="data" format="idxml,mzid" optional="False" label="Input file containing identified peptides and proteins" help="(-id) "/> @@ -52,5 +52,5 @@ <help>Filters a protein database (FASTA format) based on identified proteins -For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_DatabaseFilter.html</help> +For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/UTILS_DatabaseFilter.html</help> </tool>