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1 <?xml version='1.0' encoding='UTF-8'?>
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2 <tool id="MzTabExporter" name="MzTabExporter" version="2.0.0">
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3 <description>Exports various XML formats to an mzTab file.</description>
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4 <macros>
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5 <token name="@EXECUTABLE@">MzTabExporter</token>
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6 <import>macros.xml</import>
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7 </macros>
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8 <expand macro="stdio"/>
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9 <expand macro="requirements"/>
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10 <command>MzTabExporter
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11
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12 #if $param_in_feature:
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13 -in_feature $param_in_feature
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14 #end if
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15 #if $param_in_consensus:
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16 -in_consensus $param_in_consensus
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17 #end if
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18 #if $param_in_id:
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19 -in_id $param_in_id
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20 #end if
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21 #if $param_out:
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22 -out $param_out
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23 #end if
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24 -threads \${GALAXY_SLOTS:-24}
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25 #if $adv_opts.adv_opts_selector=='advanced':
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26 #if $adv_opts.param_force:
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27 -force
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28 #end if
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29 #end if
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30 </command>
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31 <inputs>
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32 <param name="param_in_feature" type="data" format="featurexml" optional="True" label="FeatureXMLs used to generate the mzTab file" help="(-in_feature) "/>
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33 <param name="param_in_consensus" type="data" format="consensusxml" optional="True" label="ConsensusXMLs used to generate the mzTab file" help="(-in_consensus) "/>
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34 <param name="param_in_id" type="data" format="idxml" optional="True" label="Identifications used to generate the mzTab file" help="(-in_id) "/>
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35 <expand macro="advanced_options">
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36 <param name="param_force" type="boolean" truevalue="-force" falsevalue="" checked="false" optional="True" label="Overwrite tool specific checks" help="(-force) "/>
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37 </expand>
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38 </inputs>
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39 <outputs>
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40 <data name="param_out" format="tabular"/>
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41 </outputs>
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42 <help>**What it does**
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43
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44 Exports various XML formats to an mzTab file.
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45
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46
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47 For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/TOPP_MzTabExporter.html</help>
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48 <expand macro="references"/>
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49 </tool>
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