# HG changeset patch
# User galaxyp
# Date 1529967850 14400
# Node ID d8e584de1e341e59d7403c90e8a7d5650e337fca
# Parent  b3fbaf973cfdb14f85e58c791a12d39d9dcbdd25
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_qualitycontrol commit a0cadd9fe40da0094dc87bbf5e06a323973a0b42

diff -r b3fbaf973cfd -r d8e584de1e34 msi_qualitycontrol.xml
--- a/msi_qualitycontrol.xml	Thu Jun 21 16:45:39 2018 -0400
+++ b/msi_qualitycontrol.xml	Mon Jun 25 19:04:10 2018 -0400
@@ -758,8 +758,8 @@
                 plot(msidata[minmasspixel:maxmasspixel,], pixel=1:ncol(msidata),main="Average spectrum per sample",
                 pixel.groups=msidata\$combined_sample, key=key_zoomed, col=hue_pal()(number_combined),superpose=TRUE)
                 abline(v=c(inputcalibrantmasses[mass] -plusminusvalues[count], inputcalibrantmasses[mass] ,inputcalibrantmasses[mass] +plusminusvalues[count]), col="black", lty=c(3,1,3))
+            }
             count=count+1
-            }
         }
 
     ######### 17) ppm difference input calibrant m/z and m/z with max intensity in given m/z range#########