Mercurial > repos > galaxyp > msconvert_nix
diff test-data/small-numpressS.mzML @ 1:b00023193f6e draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msconvert commit d56659dd48f8c554a832787e71aca6ae65c90848
| author | galaxyp |
|---|---|
| date | Tue, 14 Mar 2017 16:45:13 -0400 |
| parents | 5f8848c7d7b7 |
| children |
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--- a/test-data/small-numpressS.mzML Fri Apr 08 15:46:25 2016 -0400 +++ b/test-data/small-numpressS.mzML Tue Mar 14 16:45:13 2017 -0400 @@ -2,7 +2,7 @@ <indexedmzML xmlns="http://psi.hupo.org/ms/mzml" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.2_idx.xsd"> <mzML xmlns="http://psi.hupo.org/ms/mzml" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.0.xsd" id="small" version="1.1.0"> <cvList count="2"> - <cv id="MS" fullName="Proteomics Standards Initiative Mass Spectrometry Ontology" version="3.79.0" URI="http://psidev.cvs.sourceforge.net/*checkout*/psidev/psi/psi-ms/mzML/controlledVocabulary/psi-ms.obo"/> + <cv id="MS" fullName="Proteomics Standards Initiative Mass Spectrometry Ontology" version="4.0.1" URI="http://psidev.cvs.sourceforge.net/*checkout*/psidev/psi/psi-ms/mzML/controlledVocabulary/psi-ms.obo"/> <cv id="UO" fullName="Unit Ontology" version="12:10:2011" URI="http://obo.cvs.sourceforge.net/*checkout*/obo/obo/ontology/phenotype/unit.obo"/> </cvList> <fileDescription> @@ -20,7 +20,7 @@ <cvParam cvRef="MS" accession="MS:1000569" name="SHA-1" value="4efa13a2795731b5f2a1ff1c463daf0d24b9a9d9"/> </sourceFile> <sourceFile id="small-peakpicking-cwt-allMS.mzML" name="small-peakpicking-cwt-allMS.mzML" location="file:///"> - <cvParam cvRef="MS" accession="MS:1000569" name="SHA-1" value="8af1e376b6ed33679f7fcf965a5e7fd6b1bf77b7"/> + <cvParam cvRef="MS" accession="MS:1000569" name="SHA-1" value="2d5cdd239d18de37386cf9409e30693767b16f82"/> </sourceFile> </sourceFileList> </fileDescription> @@ -37,7 +37,7 @@ <software id="pwiz" version="3.0.8981"> <cvParam cvRef="MS" accession="MS:1000615" name="ProteoWizard software" value=""/> </software> - <software id="pwiz_3.0.8990" version="3.0.8990"> + <software id="pwiz_3.0.9987" version="3.0.9987"> <cvParam cvRef="MS" accession="MS:1000615" name="ProteoWizard software" value=""/> </software> </softwareList> @@ -82,10 +82,10 @@ </processingMethod> </dataProcessing> <dataProcessing id="pwiz_Reader_conversion"> - <processingMethod order="0" softwareRef="pwiz_3.0.8990"> + <processingMethod order="0" softwareRef="pwiz_3.0.9987"> <cvParam cvRef="MS" accession="MS:1000544" name="Conversion to mzML" value=""/> </processingMethod> - <processingMethod order="1" softwareRef="pwiz_3.0.8990"> + <processingMethod order="1" softwareRef="pwiz_3.0.9987"> <cvParam cvRef="MS" accession="MS:1000035" name="peak picking" value=""/> </processingMethod> </dataProcessing> @@ -1272,7 +1272,7 @@ </binaryDataArray> </binaryDataArrayList> </spectrum> - <spectrum index="22" id="controllerType=0 controllerNumber=1 scan=23" defaultArrayLength="701" dataProcessingRef="pwiz_Reader_conversion"> + <spectrum index="22" id="controllerType=0 controllerNumber=1 scan=23" defaultArrayLength="700" dataProcessingRef="pwiz_Reader_conversion"> <cvParam cvRef="MS" accession="MS:1000579" name="MS1 spectrum" value=""/> <cvParam cvRef="MS" accession="MS:1000511" name="ms level" value="1"/> <cvParam cvRef="MS" accession="MS:1000130" name="positive scan" value=""/> @@ -1298,17 +1298,17 @@ </scan> </scanList> <binaryDataArrayList count="2"> - <binaryDataArray encodedLength="7480"> + <binaryDataArray encodedLength="7468"> <cvParam cvRef="MS" accession="MS:1000523" name="64-bit float" value=""/> <cvParam cvRef="MS" accession="MS:1000576" name="no compression" value=""/> <cvParam cvRef="MS" accession="MS:1000514" name="m/z array" value="" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z"/> - 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