Mercurial > repos > galaxyp > mqppep_preproc

diff MaxQuantProcessingScript.R @ 3:de65777a9baa draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3dcf0d08f006b888061ff83eadc65e550d751869
author galaxyp
date Tue, 31 Jan 2023 22:26:25 +0000
parents 2ccb9727516b
children 37203e501ea6
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--- a/MaxQuantProcessingScript.R	Mon Dec 12 22:00:48 2022 +0000
+++ b/MaxQuantProcessingScript.R	Tue Jan 31 22:26:25 2023 +0000
@@ -73,7 +73,9 @@
 }
 
 # Generate phosphopeptide and build list when applied
+# nolint start: squash un-actionable cyclomatic_complexity warning
 phosphopeptide_func <- function(df) {
+# nolint end
   # generate peptide sequence and list of phosphopositions
   phosphoprobsequence <-
     strsplit(as.character(df["Phospho (STY) Score diffs"]), "")[[1]]