Mercurial > repos > galaxyp > maxquant
comparison test-data/04/config.yml @ 6:f2f79f0be7d1 draft
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit f63ff6d5d0c44012a17e87293811765951655bd5"
| author | galaxyp |
|---|---|
| date | Mon, 01 Jun 2020 15:50:52 +0000 |
| parents | 1cdde5989a2d |
| children | 057bf124c80e |
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| 5:1cdde5989a2d | 6:f2f79f0be7d1 |
|---|---|
| 12 lfqStabilizeLargeRatios: True | 12 lfqStabilizeLargeRatios: True |
| 13 lfqRequireMsms: True | 13 lfqRequireMsms: True |
| 14 advancedSiteIntensities: True | 14 advancedSiteIntensities: True |
| 15 matchBetweenRuns: False | 15 matchBetweenRuns: False |
| 16 includeContaminants: True | 16 includeContaminants: True |
| 17 minPeptideLengthForUnspecificSearch: 8 | |
| 18 maxPeptideLengthForUnspecificSearch: 25 | |
| 19 decoyMode: revert | |
| 20 peptideFdr: 0.01 | |
| 21 proteinFdr: 0.01 | |
| 17 quantMode: 1 | 22 quantMode: 1 |
| 18 restrictProteinQuantification: True | 23 restrictProteinQuantification: True |
| 19 restrictMods: [] | 24 restrictMods: [Oxidation (M),Acetyl (Protein N-term)] |
| 20 useCounterparts: True | 25 useCounterparts: True |
| 21 paramGroups: | 26 paramGroups: |
| 22 - files: ['BSA_min_23.mzXML', 'BSA_min_22.mzxml'] | 27 - files: ['BSA_min_23.mzXML', 'BSA_min_22.mzxml'] |
| 23 maxMissedCleavages: 2 | 28 maxMissedCleavages: 2 |
| 24 fixedModifications: [Carbamidomethyl (C)] | 29 fixedModifications: [Carbamidomethyl (C)] |