Mercurial > repos > galaxyp > flashlfq
comparison flashlfq.xml @ 8:69cd4ab3145b draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/flashlfq commit 4b7c3ac13ae2d5d3b18784c580218f39ed7de6e1
author | galaxyp |
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date | Fri, 26 Jan 2018 09:07:49 -0500 |
parents | c4c61493c9a8 |
children | 944d155c01c9 |
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7:c4c61493c9a8 | 8:69cd4ab3145b |
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1 <tool id="flashlfq" name="FlashLFQ" version="0.1.99"> | 1 <tool id="flashlfq" name="FlashLFQ" version="0.1.100"> |
2 <description>ultrafast label-free quantification for mass-spectrometry proteomics</description> | 2 <description>ultrafast label-free quantification for mass-spectrometry proteomics</description> |
3 <requirements> | 3 <requirements> |
4 <requirement type="package" version="0.1.99">flashlfq</requirement> | 4 <requirement type="package" version="0.1.100">flashlfq</requirement> |
5 </requirements> | 5 </requirements> |
6 <command><![CDATA[ | 6 <command><![CDATA[ |
7 #import re | 7 #import re |
8 #set $idt_path = $re.sub('\s','_',$re.sub('[.][^.]*$','',$idt.display_name.split('/')[-1])) + ".psmtsv" | 8 #set $idt_path = $re.sub('\s','_',$re.sub('[.][^.]*$','',$idt.display_name.split('/')[-1])) + ".psmtsv" |
9 ln -s '${idt}' '${idt_path}' && | 9 ln -s '${idt}' '${idt_path}' && |