Mercurial > repos > galaxyp > encyclopedia_library_to_blib

diff encyclopedia_library_to_blib.xml @ 1:7603f590a1a1 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/encyclopedia/tools/encyclopedia commit d94002fc79f552c8a64ffca86298396b1568df97"
author galaxyp
date Mon, 14 Sep 2020 16:59:24 +0000
parents d37d900794f6
children d080bb31e3dd
line wrap: on
line diff
--- a/encyclopedia_library_to_blib.xml	Fri Jun 19 14:03:15 2020 +0000
+++ b/encyclopedia_library_to_blib.xml	Mon Sep 14 16:59:24 2020 +0000
@@ -4,8 +4,11 @@
         <import>macros.xml</import>
     </macros>
     <expand macro="requirements" />
-    <command detect_errors="exit_code"><![CDATA[
+    <command detect_errors="aggressive"><![CDATA[
         EncyclopeDIA -convert -libtoblib
+            -Djava.awt.headless=true -Duser.language=en-US -Duser.region=US
+            -Xmx\$[ \${GALAXY_MEMORY_MB:-20480} / 1024 ]g
+            -numberOfThreadsUsed "\${GALAXY_SLOTS:-4}"
         -i '$i'
         -o '$output'
         #if $istest == 'yes'