view test-data/make_comp_file.sh @ 8:cc203b7580e7 draft

"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/eggnog_mapper/eggnog_mapper commit d08008686fd3cace19449ac950c4e0864b7a8ef8"

#!/bin/bash

base_path=$1

emapper.py \
    -i $base_path/test-data/nlim_fragment.fasta \
    --output DIA_nlim \
    --output_dir $base_path/test-data \
    --override \
    -m diamond \
    --data_dir $base_path/test-data/cached_locally \
    --no_file_comments \
    --no_annot