Mercurial > repos > galaxyp > custom_pro_db_annotation_data_manager

view data_manager_conf.xml @ 10:a0a5aa56d29c draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/custom_pro_db commit 4bb5b663989d5f04e8fb74b111456f16d6edaa66
author galaxyp
date Tue, 14 Mar 2017 14:11:41 -0400
parents 9fec6c7f46eb
children
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<?xml version="1.0"?>
<data_managers>

    <data_manager tool_file="data_manager/customProDB_annotation.xml" id="custom_pro_db_annotation_builder" version="0.0.1">
        <data_table name="customProDB">
            <output>
                <column name="value" />
                <column name="dbkey" />
                <column name="name" />
                <column name="path" output_ref="out_file" >
                    <move type="directory" relativize_symlinks="True">
                        <!-- <source>${path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base -->
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/customProDB</target>
                    </move>
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/customProDB</value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>
            </output>
        </data_table>
    </data_manager>

</data_managers>