diff tool-data/customProDB.loc.sample @ 5:a0ca66b32792 draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/data_manager_customProDB commit 98f3323d4b92a4a3668788b3e1bad1a6529fd6df-dirty

--- a/tool-data/customProDB.loc.sample	Thu Jan 28 18:46:50 2016 -0500
+++ b/tool-data/customProDB.loc.sample	Tue May 24 11:47:26 2016 -0400
@@ -1,18 +1,16 @@
 #This file lists the locations and dbkeys of all the fasta files
-#under the "genome" directory (a directory that contains a directory
-#for each build). The script extract_fasta.py will generate the file
-#all_fasta.loc. This file has the format (white space characters are
-#TAB characters):
+#under the "customProDB" directory (a subdirectory of a genome build).
+#This file has the format (white space characters are TAB characters):
 #
-#<unique_build_id>	<dbkey>		<display_name>	<file_path>
+#<unique_build_id>	<dbkey>		<display_name>	<path to annotation files>
 #
 #So, all_fasta.loc could look something like this:
 #
-#apiMel3	apiMel3	Honeybee (Apis mellifera): apiMel3		/path/to/genome/apiMel3/apiMel3.fa
-#hg19canon	hg19		Human (Homo sapiens): hg19 Canonical		/path/to/genome/hg19/hg19canon.fa
-#hg19full	hg19		Human (Homo sapiens): hg19 Full			/path/to/genome/hg19/hg19full.fa
+#apiMel3	apiMel3	Honeybee (Apis mellifera): apiMel3		/path/to/genome/apiMel3
+#hg19canon	hg19		Human (Homo sapiens): hg19 Canonical		/path/to/genome/hg19
+#hg19full	hg19		Human (Homo sapiens): hg19 Full			/path/to/genome/hg19full
 #
-#Your all_fasta.loc file should contain an entry for each individual
+#Your customProDB.loc file should contain an entry for each individual
 #fasta file. So there will be multiple fasta files for each build,
 #such as with hg19 above.
 #