Mercurial > repos > galaxyp > cardinal_spectra_plots

directory /test-data/ @ 1:45fb4dd8400b draft

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file 112_annotation_output.tabular 744 -rw-r--r--
file 112_auto_combined.RData 295847 -rw-r--r--
file 112_auto_combined_QC.pdf 8173 -rw-r--r--
file 123_annotation.tabular 248 -rw-r--r--
file 123_annotation_output.tabular 453 -rw-r--r--
file 123_combined.RData 255593 -rw-r--r--
file 123_combined_QC.pdf 8152 -rw-r--r--
file 12_annotation_output.tabular 438 -rw-r--r--
file 12_combined.RData 209392 -rw-r--r--
file 12_combined_QC.pdf 8105 -rw-r--r--
file 2123_annotation_output.tabular 421 -rw-r--r--
file 2123_auto_combined.RData 348827 -rw-r--r--
file 2123_auto_combined_QC.pdf 6164 -rw-r--r--
file 3_files_combined.RData 255563 -rw-r--r--
file Analyze75.hdr 384 -rwxr-xr-x
file Analyze75.img 801684 -rwxr-xr-x
file Analyze75.t2m 178152 -rwxr-xr-x
file Example_Continuous.ibd 47976 -rwxr-xr-x
file Example_Continuous.imzML 16845 -rwxr-xr-x
file Example_Processed.ibd 604744 -rw-r--r--
file Example_Processed.imzML 23160 -rw-r--r--
file Heatmaps_LM8_file16.pdf 4913 -rw-r--r--
file Heatmaps_analyze75.pdf 9155 -rw-r--r--
file Heatmaps_imzml.pdf 6977 -rw-r--r--
file Heatmaps_rdata.pdf 6980 -rw-r--r--
file Plot_analyze75.pdf 20081 -rw-r--r--
file Plot_analyze75_allpixels.pdf 59037 -rw-r--r--
file Plot_empty_spectra.pdf 4782 -rw-r--r--
file Plot_imzml.pdf 26962 -rw-r--r--
file Plot_rdata.pdf 37890 -rw-r--r--
file QC_analyze75.pdf 165925 -rw-r--r--
file QC_empty_spectra.pdf 5225 -rw-r--r--
file QC_imzml.pdf 81368 -rw-r--r--
file QC_rdata.pdf 322701 -rw-r--r--
file analyze75.svg 1635 -rw-r--r--
file analyze75_filtered2.pdf 8381 -rw-r--r--
file analyze_filtered.RData 1710 -rw-r--r--
file analyze_filtered.pdf 9220 -rw-r--r--
file analyze_filteredoutside.RData 38708 -rw-r--r--
file analyze_originaloutput.RData 656699 -rw-r--r--
file analyze_originaloutput2.RData 656700 -rw-r--r--
file annotations.tabular 188 -rw-r--r--
file annotations_file1.tabular 188 -rw-r--r--
file annotations_file2.tabular 188 -rw-r--r--
file annotations_file3.tabular 206 -rw-r--r--
file annotations_rdata.tabular 160 -rw-r--r--
file centroids_rdata.pdf 160610 -rw-r--r--
file classes_ssc.tabular 191 -rw-r--r--
file cluster_skm.RData 524414 -rw-r--r--
file cluster_skm.tabular 301 -rw-r--r--
file empty_spectra.rdata 156496 -rw-r--r--
file features_out1.tabular 115166 -rw-r--r--
file features_out3.tabular 115166 -rw-r--r--
file features_test1.tabular 0 -rw-r--r--
file features_test2.tabular 7974 -rw-r--r--
file features_test3.tabular 0 -rw-r--r--
file features_test4.tabular 7934 -rw-r--r--
file features_test5.tabular 0 -rw-r--r--
file features_test6.tabular 1138 -rw-r--r--
file features_test7.tabular 7974 -rw-r--r--
file featuresofinterest5.tabular 399 -rw-r--r--
file imzml_filtered.RData 1546 -rw-r--r--
file imzml_filtered.pdf 9047 -rw-r--r--
file imzml_filtered3.RData 5134 -rw-r--r--
file imzml_filtered3.pdf 9188 -rw-r--r--
file imzml_filtered4.RData 11501 -rw-r--r--
file imzml_filtered4.pdf 8518 -rw-r--r--
file imzml_filtered5.RData 1584 -rw-r--r--
file imzml_filtered5.pdf 9216 -rw-r--r--
file inputcalibrantfile1.tabular 18 -rwxr-xr-x
file inputcalibrantfile2.txt 39 -rwxr-xr-x
file inputpeptides.tabular 34 -rw-r--r--
file inputpeptides2.tabular 27 -rw-r--r--
file inputpixels_2column.tabular 37 -rw-r--r--
file int_matrix1.tabular 84687 -rw-r--r--
file int_matrix3.tabular 84687 -rw-r--r--
file kmeans_analyze.pdf 347579 -rw-r--r--
file loadings_pca.tabular 58149 -rw-r--r--
file mean_out2.tabular 174389 -rw-r--r--
file msidata_1.RData 115643 -rw-r--r--
file msidata_2.RData 169058 -rw-r--r--
file msidata_3.RData 122067 -rw-r--r--
file pca_imzml.pdf 45305 -rw-r--r--
file pixel_annotation_file1.tabular 300 -rw-r--r--
file pixel_out2.tabular 512 -rw-r--r--
file pixel_out3.tabular 461 -rw-r--r--
file pixels_test1.tabular 0 -rw-r--r--
file pixels_test2.tabular 372 -rw-r--r--
file pixels_test3.tabular 0 -rw-r--r--
file pixels_test4.tabular 372 -rw-r--r--
file pixels_test5.tabular 0 -rw-r--r--
file pixels_test6.tabular 372 -rw-r--r--
file pixels_test7.tabular 372 -rw-r--r--
file preprocessed.RData 81451 -rw-r--r--
file preprocessed.rdata 81451 -rw-r--r--
file preprocessing_results1.RData 2977 -rw-r--r--
file preprocessing_results1.pdf 5707 -rw-r--r--
file preprocessing_results1.txt 284 -rw-r--r--
file preprocessing_results2.RData 42983 -rw-r--r--
file preprocessing_results2.pdf 7579 -rw-r--r--
file preprocessing_results2.txt 14241 -rw-r--r--
file preprocessing_results3.RData 53401 -rw-r--r--
file preprocessing_results3.pdf 5331 -rw-r--r--
file preprocessing_results4.RData 10159 -rw-r--r--
file preprocessing_results4.pdf 5203 -rw-r--r--
file preprocessing_results4.txt 25821 -rw-r--r--
file preprocessing_results5.RData 3751 -rw-r--r--
file preprocessing_results5.pdf 5050 -rw-r--r--
file preprocessing_results5.txt 6791 -rw-r--r--
file random_factors.tabular 228 -rw-r--r--
file rdata_notfiltered.RData 81451 -rw-r--r--
file rdata_notfiltered.pdf 8295 -rw-r--r--
file scores_pca.tabular 448 -rw-r--r--
file sd_out2.tabular 192574 -rw-r--r--
file spectra_info_123_combi.txt 659 -rw-r--r--
file spectra_info_imzml.txt 479 -rw-r--r--
file tabular_LM8file16.tabular 45 -rw-r--r--
file tabular_analyze75.tabular 60 -rw-r--r--
file tabular_imzml.tabular 69 -rw-r--r--
file tabular_rdata.tabular 46 -rw-r--r--
file test1.pdf 16075 -rw-r--r--
file test2.pdf 77882 -rw-r--r--
file test2.rdata 222904 -rw-r--r--
file test3.pdf 15636 -rw-r--r--
file test4.pdf 74273 -rw-r--r--
file test4.rdata 260232 -rw-r--r--
file test5.pdf 12848 -rw-r--r--
file test6.pdf 56963 -rw-r--r--
file test6.rdata 69053 -rw-r--r--
file test7.pdf 8079 -rw-r--r--
file test7.rdata 222901 -rw-r--r--
file testfile_squares.rdata 70844 -rw-r--r--
file toplabels_skm.tabular 1187 -rw-r--r--
file toplabels_ssc.tabular 3185 -rw-r--r--
file xy_coordinates.tabular 30 -rw-r--r--