diff test-data/preprocessing_results1.imzml @ 6:b3c5a1a8b46a draft

"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
author galaxyp
date Wed, 25 Mar 2020 09:25:03 +0000
parents 7f4830f0bcf3
children 56197dc457b8
line wrap: on
line diff
--- a/test-data/preprocessing_results1.imzml	Fri Dec 13 18:49:34 2019 +0000
+++ b/test-data/preprocessing_results1.imzml	Wed Mar 25 09:25:03 2020 +0000
@@ -9,8 +9,8 @@
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@@ -22,19 +22,18 @@
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 			<cvParam cvRef="MS" accession="MS:1000093" name="increasing m/z scan" value="" />
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 			<cvParam cvRef="IMS" accession="IMS:1000101" name="external data" value="true" />
-			<cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" value="32-bit float" />
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-			<cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" value="32-bit float" />
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@@ -43,7 +42,7 @@
 		</sample>
 	</sampleList>
 	<softwareList count="1">
-		<software id="Cardinal" version="1.12.1">
+		<software id="Cardinal" version="2.4.0">
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@@ -51,10 +50,16 @@
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 	</scanSettingsList>
 	<instrumentConfigurationList count="1">
-		<instrumentConfiguration id="IC1" />
+		<instrumentConfiguration id="IC1">
+			<cvParam cvRef="MS" accession="MS:1000031" name="instrument model" />
+		</instrumentConfiguration>
 	</instrumentConfigurationList>
 	<dataProcessingList count="1">
 		<dataProcessing id="CardinalWriteImzML">
@@ -73,21 +78,23 @@
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 						<cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="1" />
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@@ -127,21 +136,23 @@
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 						<cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="1" />
+						<userParam name="3DPositionX" value="3.000000" />
+						<userParam name="3DPositionY" value="1.000000" />
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-						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="8" />
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 						<cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="2" />
+						<userParam name="3DPositionX" value="1.000000" />
+						<userParam name="3DPositionY" value="2.000000" />
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 						<cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="2" />
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@@ -208,21 +223,23 @@
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 						<cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="2" />
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-						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="8" />
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@@ -235,21 +252,23 @@
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 						<cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="3" />
+						<userParam name="3DPositionX" value="1.000000" />
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@@ -262,21 +281,23 @@
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+						<userParam name="3DPositionX" value="2.000000" />
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-						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="8" />
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