# HG changeset patch
# User galaxyp
# Date 1586273433 0
# Node ID f270ac79c0a1b483a4380444bdd65d8fa72b1b1e
# Parent  7b2642f6c0047b6cc43ae0f39a6d98e5d64a4ecb
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/bed_to_protein_map commit 2a470e2c775a7427aa530e058510e4dc7b6d8e80"

diff -r 7b2642f6c004 -r f270ac79c0a1 bed_to_protein_map.py
--- a/bed_to_protein_map.py	Thu Jan 04 16:33:42 2018 -0500
+++ b/bed_to_protein_map.py	Tue Apr 07 15:30:33 2020 +0000
@@ -34,14 +34,14 @@
     try:
         for linenum, line in enumerate(input_rdr):
             if args.debug:
-                print >> sys.stderr, "%d: %s\n" % (linenum, line)
+                sys.stderr.write("%d: %s\n" % (linenum, line))
             if line.startswith('#'):
                 continue
             if line.strip() == '':
                 continue
             fields = line.rstrip('\r\n').split('\t')
             if len(fields) < 12:
-                print >> sys.stderr, "%d: %s\n" % (linenum, line)
+                sys.stderr.write("%d: %s\n" % (linenum, line))
                 continue
             (chrom, _chromStart, _chromEnd, name, score, strand,
              _thickStart, _thickEnd, itemRgb,
@@ -91,8 +91,8 @@
                                         strand, cds_start, cds_end))
                     cds_start = cds_end
                 pass
-    except Exception, e:
-        print >> sys.stderr, "failed: %s" % e
+    except Exception as e:
+        sys.stderr.write("failed: %s\n" % e)
         exit(1)
 
 
diff -r 7b2642f6c004 -r f270ac79c0a1 bed_to_protein_map.xml
--- a/bed_to_protein_map.xml	Thu Jan 04 16:33:42 2018 -0500
+++ b/bed_to_protein_map.xml	Tue Apr 07 15:30:33 2020 +0000
@@ -1,6 +1,7 @@
-<tool id="bed_to_protein_map" name="bed to protein map" version="0.1.0">
+<tool id="bed_to_protein_map" name="bed to protein map" version="0.2.0">
     <description>genomic location of proteins for MVP</description>
     <requirements>
+        <requirement type="package" version="3.7">python</requirement>
     </requirements>
     <stdio>
         <exit_code range="1:" />