# HG changeset patch # User galaxy-australia # Date 1649053032 0 # Node ID 8d047c940e71f592b5d6c20df335217ba5e135f0 # Parent 5c48d182d4fd1e6b57daad92cfa7e5be5cb926c6 "planemo upload for repository https://github.com/usegalaxy-au/tools-au commit c70e1155d0ba84ad9aadec84633e9024e78d3765-dirty" diff -r 5c48d182d4fd -r 8d047c940e71 README.md --- a/README.md Mon Apr 04 06:09:17 2022 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,12 +0,0 @@ -# Cactus - -This suite contains a wrapper for the [Cactus](github.com/comparativeGenomicsToolkit/cactus) whole-genome aligner and another wrapper for exporting the data it generates. - -## Requirements - -The developers provide an official Docker container. -However, the Docker container won't run unless `/etc/passwd` is mounted ([see this issue](https://github.com/ComparativeGenomicsToolkit/cactus/issues/677)). -Because of this, it is recommended to run Cactus using Singularity. - -Cactus uses a lot of RAM. We have tested it on Galaxy using 24 GB of RAM for a -progressive alignment of three chromosome-level, 150 megabase genomes. \ No newline at end of file diff -r 5c48d182d4fd -r 8d047c940e71 README.rst --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/README.rst Mon Apr 04 06:17:12 2022 +0000 @@ -0,0 +1,18 @@ +Cactus +====== + +This suite contains a wrapper for the +`Cactus `__ whole-genome +aligner and another wrapper for exporting the data it generates. + +Requirements +------------ + +The developers provide an official Docker container. However, the Docker +container won’t run unless ``/etc/passwd`` is mounted (`see this +issue `__). +Because of this, it is recommended to run Cactus using Singularity. + +Cactus uses a lot of RAM. We have tested it on Galaxy using 24 GB of RAM +for a progressive alignment of three chromosome-level, 150 megabase +genomes.