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view rgweblogo/test-data/rgClustal_testout.fasta @ 15:01ec43556e16 draft

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use iuc dependendencies
author fubar
date Mon, 18 Nov 2013 02:19:03 -0500
parents 26fc5220aaa2
children
line wrap: on
line source

>c_briggsae-chrII_+_
---ATGAGCTTCCACAAAAGCATGAGCTTT
CTCAGCTTCTGCCACATCAGCATTCAAATG
ATC
>c_brenneri-Cbre_Contig60_+_
---ATGAGCCTCCACAACAGCATGATTTTT
CTCGGCTTCCGCCACATCCGCATTCAAATG
ATC
>c_remanei-Crem_Contig172_-_
---ATGAGCCTCTACAACCGCATGATTCTT
TTCAGCCTCTGCCACGTCCGCATTCAAATG
CTC
>c_elegans-II_+_
---ATGAGCCTCTACTACAGCATGATTCTT
CTCAGCTTCTGCAACGTCAGCATTCAGATG
ATC
>c_briggsae-chrII_+_bar
---CCGGAGTCGATCCCTGAAT--------
------------------------------
---
>c_brenneri-Cbre_Contig60fee_+_
---ACGAAGTCGATCCCTGAAA--------
-TCAGATGAGCGGTTGACCA---GAGAACA
ACC
>c_remanei-Crem_Contig172zot_-_
---ACGAAGTCGGTCCCTATAAGGTATGAT
TTTATATGA----TGTACCATAAGGAAATA
GTC
>c_elegans-II_+_meh
---ACGAAGTCGGTCCCTGAAC--AATTAT
TT----TGA----TATA---GAAAGAAACG
GTA
>c_briggsae-chrIfooI_+_
CGCACAAATATGATGCACAAATCCACAACC
TAAAGCATCTCCGATAACGTTGACCGAAGT
---
>c_brenneri-Cbre_Contig60gak_+_
CGCACAAATGTAGTGGACAAATCCGCATCC
CAAAGCGTCTCCGATAACATTTACCGAAGT
---
>c_remanei-Crem_Contig172foo_-_
AGCACAAATGTAATGAACGAATCCGCATCC
CAACGCATCGCCAATCACATTCACAGATGT
---
>c_elegans-II_+_more
TGCACAAATGTGATGAACGAATCCACATCC
CAATGCATCACCGATCACATTGACAGATGT
---