# HG changeset patch
# User fubar
# Date 1393976576 18000
# Node ID bab81f19eeea585f025c9b759d96bb455ecc27e4
# Parent  9d72d0221c7ffd0cafa0019de7a61ab0e2c40eaf
Changed over to a separate STAR package dependency

diff -r 9d72d0221c7f -r bab81f19eeea rg_rnaStar.xml
--- a/rg_rnaStar.xml	Tue Mar 04 18:40:08 2014 -0500
+++ b/rg_rnaStar.xml	Tue Mar 04 18:42:56 2014 -0500
@@ -1,8 +1,9 @@
 <tool id="rna_star" name="RNA-STAR" version="0.23">
     <description>Gapped-read mapper for RNA-seq data</description>
     <requirements>
-        <requirement type="package" version="2.3.0e">rnastar</requirement>
-        <requirement type="package" version="0.1.19">samtools</requirement>
+        <requirement type="package" version="2.3.0e">package_rnastar</requirement>
+        <requirement type="package" version="0.1.19">package_samtools</requirement>
+        <requirement type="package" version="2.3.0e">star_230e</requirement>
     </requirements>
     <command>
     ##
diff -r 9d72d0221c7f -r bab81f19eeea tool_dependencies.xml
--- a/tool_dependencies.xml	Tue Mar 04 18:40:08 2014 -0500
+++ b/tool_dependencies.xml	Tue Mar 04 18:42:56 2014 -0500
@@ -1,9 +1,9 @@
 <?xml version="1.0"?>
 <tool_dependency>
-    <package name="rnastar" version="2.3.0e">
+    <package name="package_rnastar" version="2.3.0e">
         <repository changeset_revision="6dcdb10d0d8b" name="package_rnastar_230e" owner="fubar" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu/" />
     </package>
-    <package name="samtools" version="0.1.19">
+    <package name="package_samtools" version="0.1.19">
         <repository changeset_revision="54195f1d4b0f" name="package_samtools_0_1_19" owner="iuc" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu/" />
     </package>
     <package name="star_230e" version="2.3.0e">