# HG changeset patch
# User fubar
# Date 1377052763 14400
# Node ID 9f65a7b3abeb028928ead1a315f4882370313dd6
# Parent  f81bf1f1d9249a518f5ac5bae1f1bd4ec98916ce
Uploaded

diff -r f81bf1f1d924 -r 9f65a7b3abeb rgrnastar/.hg_archival.txt
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/rgrnastar/.hg_archival.txt	Tue Aug 20 22:39:23 2013 -0400
@@ -0,0 +1,5 @@
+repo: f13499e0de61898fc116ea6147a46e7dedb07103
+node: f81bf1f1d9249a518f5ac5bae1f1bd4ec98916ce
+branch: default
+latesttag: null
+latesttagdistance: 13
diff -r f81bf1f1d924 -r 9f65a7b3abeb rgrnastar/rg_rnaStar.xml
--- a/rgrnastar/rg_rnaStar.xml	Mon Aug 12 19:56:13 2013 -0400
+++ b/rgrnastar/rg_rnaStar.xml	Tue Aug 20 22:39:23 2013 -0400
@@ -116,7 +116,8 @@
     </inputs>
 
     <outputs>
-       <data format="txt" name="output_log" label="${on_string}_${jobName}_starchimjunc.bed" from_work_dir="Chimeric.out.junction">
+       <data format="txt" name="output_log" label="${on_string}_{jobName}.log" from_work_dir="Log.final.out"/>
+       <data format="interval" name="chimeric_junctions" label="${on_string}_{jobName}_starchimjunc.bed" from_work_dir="Chimeric.out.junction">
           <filter>(params['settingsType'] == 'full' and params['chim_segment_min'] > 0)</filter>
           <actions>
              <conditional name="refGenomeSource.genomeSource">