Mercurial > repos > fubar > rgrnastar_203e
comparison tool-data/rnastar_indices.loc.sample @ 0:f13499e0de61 draft
Initial commit
| author | fubar |
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| date | Fri, 09 Aug 2013 04:31:52 -0400 |
| parents | |
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| -1:000000000000 | 0:f13499e0de61 |
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| 1 #This is a sample file distributed with Galaxy that enables tools | |
| 2 #to use a directory of rna-star indexed sequences data files. You will | |
| 3 #need to create these data files and then create a bowtie_indices.loc | |
| 4 #file similar to this one (store it in this directory) that points to | |
| 5 #the directories in which those files are stored. The bowtie2_indices.loc | |
| 6 #file has this format (longer white space characters are TAB characters): | |
| 7 # | |
| 8 #<unique_build_id> <dbkey> <display_name> <file_base_path> | |
| 9 # | |
| 10 hg19 hg19 hg19 full /data/ucsc/hg19/rnastar | |
| 11 hg18 hg18 hg18 full /data/ucsc/hg18/rnastar | |
| 12 mm9 mm9 mm9 full /data/ucsc/mm9/rnastar | |
| 13 mm10 mm10 mm10 full /data/ucsc/mm10/rnastar | |
| 14 rn4 rn4 rn4 full /data/ucsc/rn4/rnastar | |
| 15 rn5 rn5 rn5 full /data/ucsc/rn5/rnastar | |
| 16 |