rgrnastar_203e: tool-data/rnastar_indices.loc.sample annotate

annotate tool-data/rnastar_indices.loc.sample @ 3:00ab5d9c061f draft

Uploaded

author	fubar
date	Fri, 09 Aug 2013 05:13:04 -0400
parents	f13499e0de61
children

rev	line source
0 f13499e0de61 Initial commit fubar parents: diff changeset	1 #This is a sample file distributed with Galaxy that enables tools
f13499e0de61 Initial commit fubar parents: diff changeset	2 #to use a directory of rna-star indexed sequences data files. You will
f13499e0de61 Initial commit fubar parents: diff changeset	3 #need to create these data files and then create a bowtie_indices.loc
f13499e0de61 Initial commit fubar parents: diff changeset	4 #file similar to this one (store it in this directory) that points to
f13499e0de61 Initial commit fubar parents: diff changeset	5 #the directories in which those files are stored. The bowtie2_indices.loc
f13499e0de61 Initial commit fubar parents: diff changeset	6 #file has this format (longer white space characters are TAB characters):
f13499e0de61 Initial commit fubar parents: diff changeset	7 #
f13499e0de61 Initial commit fubar parents: diff changeset	8 #<unique_build_id> <dbkey> <display_name> <file_base_path>
f13499e0de61 Initial commit fubar parents: diff changeset	9 #
f13499e0de61 Initial commit fubar parents: diff changeset	10 hg19 hg19 hg19 full /data/ucsc/hg19/rnastar
f13499e0de61 Initial commit fubar parents: diff changeset	11 hg18 hg18 hg18 full /data/ucsc/hg18/rnastar
f13499e0de61 Initial commit fubar parents: diff changeset	12 mm9 mm9 mm9 full /data/ucsc/mm9/rnastar
f13499e0de61 Initial commit fubar parents: diff changeset	13 mm10 mm10 mm10 full /data/ucsc/mm10/rnastar
f13499e0de61 Initial commit fubar parents: diff changeset	14 rn4 rn4 rn4 full /data/ucsc/rn4/rnastar
f13499e0de61 Initial commit fubar parents: diff changeset	15 rn5 rn5 rn5 full /data/ucsc/rn5/rnastar
f13499e0de61 Initial commit fubar parents: diff changeset	16