Mercurial > repos > fubar > rglasso_1_9_8

diff rglasso_cox.xml @ 9:4b62ea84c318 draft

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Uploaded
author fubar
date Thu, 01 Jan 2015 21:54:37 -0500
parents 5f2db639f8eb
children a061150f1d94
line wrap: on
line diff
--- a/rglasso_cox.xml	Sun Dec 21 05:49:14 2014 -0500
+++ b/rglasso_cox.xml	Thu Jan 01 21:54:37 2015 -0500
@@ -132,18 +132,22 @@
      <param name='do_standard' value="True" />
      <param name='cox_time' value='1' />
      <param name='cox_status' value='2' />
+     <param name='cox_id' value='2' />
+     <param name='predict_at' value='' />
      <param name='fam' value='cox' />
-     <param name='model.yvar_cols' value='' />
+     <param name='yvar_cols' value='' />
      <param name='xvar_cols' value='3,4,5' />
      <param name='force_xvar_cols' value='3' />
-     <param name='output_full' value='0' />
-     <output name='model_file'> 
+     <param name='output_full' value='F' />
+     <param name='output_pred' value='F' />
+     <output name='model_file' file='coxlassotest_modelres.xls'> 
           <assert_contents>
                 <has_text text="rhubarb" />
                 <has_text text="TRUE" />
                 <!-- &#009; is XML escape code for tab -->
-                <has_line line="regulator&#009;partial_likelihood&#009;forced_in&#009;glmnet_model&#009;best_lambda" />
-                <has_n_columns n="5" />
+                <!-- has_line line="regulator&#009;partial_likelihood&#009;forced_in&#009;glmnet_model&#009;best_lambda" / -->
+                <has_line line="regulator&#009;partial_likelihood&#009;forced_in&#009;glmnet_model&#009;best_lambda&#009;lambdaChoice&#009;alpha" />
+                <has_n_columns n="7" />
            </assert_contents>
      </output>
      <output name='html_file' file='coxlassotest.html'  compare='diff' lines_diff='10' />