# HG changeset patch # User fubar # Date 1374886132 14400 # Node ID 0cdd8d3ffebcafca38e385d1f9b11acf72bac2e8 # Parent 6e04cd0a5bc3002ad132ea8db258b3c4ca74b1a0 Uploaded diff -r 6e04cd0a5bc3 -r 0cdd8d3ffebc tool_dependencies.xml --- a/tool_dependencies.xml Fri Jul 26 20:48:36 2013 -0400 +++ b/tool_dependencies.xml Fri Jul 26 20:48:52 2013 -0400 @@ -1,40 +1,18 @@ - - + - http://cran.ms.unimelb.edu.au/src/base/R-3/R-3.0.1.tar.gz - - - - - $INSTALL_DIR - ./configure --with-blas --with-lapack --enable-R-shlib --with-x=no --prefix=$INSTALL_DIR && make && make install - - http://cran.r-project.org/src/contrib/stringr_0.6.2.tar.gz - export PATH=$INSTALL_DIR/lib/R/bin:$PATH && - export R_HOME=$INSTALL_DIR/lib/R && - export R_LIBS=$INSTALL_DIR/lib/R/library && - R CMD INSTALL stringr_0.6.2.tar.gz -l $INSTALL_DIR - http://cran.r-project.org/src/contrib/gplots_2.11.3.tar.gz - export PATH=$INSTALL_DIR/lib/R/bin:$PATH && - export R_HOME=$INSTALL_DIR/lib/R && - export R_LIBS=$INSTALL_DIR/lib/R/library && - R CMD INSTALL gplots_2.11.3.tar.gz -l $INSTALL_DIR + http://downloads.ghostscript.com/public/ghostscript-9.07.tar.gz + ./configure --prefix=$INSTALL_DIR + make + make install - $INSTALL_DIR/lib/R - $INSTALL_DIR/lib/R/library - $INSTALL_DIR/lib/R/bin + $INSTALL_DIR/bin - Modified from an older version of R by Boris by Ross Lazarus for R 3.0 - Silly having melbourne CRAN hardwired but that's what I test with. - Be nice to have interactive variables for fabric installs. - R is a free software environment for statistical computing and graphics - WARNING: See custom compilation options above - Note I've also added some R dependencies - + ghostscript needed for compressing pdfs +